RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 PNPOQ9NVS9 261 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 ZDHHC3Q9NYG2 299 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 DOCK8Q8NF50 2099 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 C2CD4DB7Z1M9 353 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 K7EQS6 105 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 IPO13O94829 963 aaKnown RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 CHRNGP07510 517 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 ADRB3P13945 408 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 RPS3P23396 243 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCG3-202ENST00000542355 NSG1P42857 185 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 PSMD8P48556 350 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 LIG3P49916 1009 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 AQP5P55064 265 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 ACOX1Q15067 660 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 TRIM67Q6ZTA4 783 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 TECPR1Q7Z6L1 1165 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 DSG4Q86SJ6 1040 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 CACUL1Q86Y37 369 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 WDR75Q8IWA0 830 aaKnown RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 AGR3Q8TD06 166 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 RIOK2Q9BVS4 552 aaKnown RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 DRC3Q9H069 523 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 TFB2MQ9H5Q4 396 aaKnown RBP10.9□□□□□ -0.66
SCG3-202ENST00000542355 IKZF3Q9UKT9 509 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 TMPRSS11EQ9UL52 423 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 DHRS7Q9Y394 339 aa10.9□□□□□ -0.66
SCG3-202ENST00000542355 A8MT66 165 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TMEM114B3SHH9 223 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 C1QTNF3-AMACRE9PGA6 284 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 F8W8V4 182 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 CDC7O00311 574 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 NEMP1O14524 444 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 MTX2O75431 263 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TSPAN12O95859 305 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 HNRNPLP14866 589 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCG3-202ENST00000542355 ATP6V0D1P61421 351 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 B4GALNT1Q00973 533 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ASPHQ12797 758 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TSNQ15631 228 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 HSF5Q4G112 596 aaPredicted RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 C2orf27AQ580R0 203 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ARL13AQ5H913 290 aaPredicted RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 CFAP157Q5JU67 520 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 MACC1Q6ZN28 852 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ERN2Q76MJ5 926 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 YTHDF3Q7Z739 585 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 ZNF781Q8N8C0 355 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 RHEBL1Q8TAI7 183 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 FAM174AQ8TBP5 190 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 STAG3L4Q8TBR4 150 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 LKAAEAR1Q8TD35 194 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 EZH1Q92800 747 aaPredicted RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 KIAA1191Q96A73 305 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ULK4Q96C45 1275 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 LINGO1Q96FE5 620 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 SHCBP1LQ9BZQ2 653 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 NCKIPSDQ9NZQ3 722 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TSR3Q9UJK0 312 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 COQ6Q9Y2Z9 468 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 SPECC1L-ADORA2AF8WAN1 911 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 UBXN8O00124 270 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 BTN3A1O00481 513 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 WNT9AO14904 365 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 SPINT1O43278 529 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 SYNCRIPO60506 623 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 TPBGLP0DKB5 382 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 CTHP32929 405 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TNFRSF4P43489 277 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 KIR2DL1P43626 348 aaPredicted RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 DNAJB13P59910 316 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ELP6Q0PNE2 266 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 SWI5Q1ZZU3 235 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ZNF284Q2VY69 593 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 GPRC6AQ5T6X5 926 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 HENMT1Q5T8I9 393 aaKnown RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 DET1Q7L5Y6 550 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 INPP5DQ92835 1189 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 AP2M1Q96CW1 435 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 TMEM237Q96Q45 408 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 LRRC37BQ96QE4 947 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 ILKAPQ9H0C8 392 aaPredicted RBP10.89□□□□□ -0.67
SCG3-202ENST00000542355 KCNK12Q9HB15 430 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 KCNK4Q9NYG8 393 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 RNF112Q9ULX5 631 aa10.89□□□□□ -0.67
SCG3-202ENST00000542355 RGSL1A5PLK6 1076 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 FADS2P1A8MWK0 482 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 H0Y858 1186 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
SCG3-202ENST00000542355 AREL1O15033 823 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 PRMT3O60678 531 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 MMP20O60882 483 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 SMIM24O75264 130 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 DCTN3O75935 186 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 MTHFD2P13995 350 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 GM2AP17900 193 aa10.88□□□□□ -0.67
SCG3-202ENST00000542355 AKT1P31749 480 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms