RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 FREM2Q5SZK8 3169 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 A0A1W2PNU3 283 aaPredicted RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 CCDC78A2IDD5 438 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 PGRMC1O00264 195 aaKnown RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 SGTAO43765 313 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 PRSS56P0CW18 603 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 MSNP26038 577 aaKnown RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 MC4RP32245 332 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 HADHAP40939 763 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 FASLGP48023 281 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 LMAN1P49257 510 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 CDKN1CP49918 316 aaPredicted RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 ARSDP51689 593 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 CYP4F3Q08477 520 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 GTF2H3Q13889 308 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 SPIDRQ14159 915 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 RTP5Q14D33 572 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 ST3GAL2Q16842 350 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 INSCQ1MX18 579 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 CCDC38Q502W7 563 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 IYDQ6PHW0 289 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 SNX20Q7Z614 316 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 TRAPPC5Q8IUR0 188 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 STYXQ8WUJ0 223 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 MAGOHBQ96A72 148 aaKnown RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 CDKN2AIPNLQ96HQ2 116 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 FAM96AQ9H5X1 160 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 CCDC86Q9H6F5 360 aaKnown RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 EIF2B3Q9NR50 452 aaKnown RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 SCHIP1Q9P0W5 487 aaPredicted RBP16.64■□□□□ 0.25
CD9-209ENST00000540891 DKK4Q9UBT3 224 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 ZMIZ1Q9ULJ6 1067 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 DNAJC16Q9Y2G8 782 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 NEU2Q9Y3R4 380 aa16.64■□□□□ 0.25
CD9-209ENST00000540891 MAP1BP46821 2468 aaKnown RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 TRBV5-4A0A0C4DH59 114 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 RHPN2P1A8MT19 583 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 D6RAR5 112 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 CES2O00748 559 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 FANCGO15287 622 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 SNX2O60749 519 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 F3P13726 295 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 COILP38432 576 aaPredicted RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 OR1D5P58170 312 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 BASP1P80723 227 aaKnown RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 CCDC173Q0VFZ6 552 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 TRIP13Q15645 432 aaPredicted RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 TMEM220Q6QAJ8 160 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 C4orf22Q6V702 233 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 ZNF534Q76KX8 674 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 TMPRSS9Q7Z410 1059 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 B3GNT8Q7Z7M8 397 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 NXPE1Q8N323 547 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 OR13J1Q8NGT2 312 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 NXPE2Q96DL1 559 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 ATXN7L3BQ96GX2 97 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 GFM1Q96RP9 751 aaKnown RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 RANBP9Q96S59 729 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 OSGEPL1Q9H4B0 414 aa16.63■□□□□ 0.25
CD9-209ENST00000540891 ATXN7L1Q9ULK2 861 aaPredicted RBP16.63■□□□□ 0.25
CD9-209ENST00000540891 IGF2RP11717 2491 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 TCRBV7S3A2A0A539 114 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 POP7O75817 140 aaKnown RBP16.62■□□□□ 0.25
CD9-209ENST00000540891 BRAFP15056 766 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 MSH3P20585 1137 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 ITGALP20701 1170 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 AKT1P31749 480 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 GNG11P61952 73 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 XKR5Q6UX68 686 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 DET1Q7L5Y6 550 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 ZNF761Q86XN6 746 aaPredicted RBP16.62■□□□□ 0.25
CD9-209ENST00000540891 PROSER1Q86XN7 944 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 BEND7Q8N7W2 519 aaPredicted RBP16.62■□□□□ 0.25
CD9-209ENST00000540891 ULK4Q96C45 1275 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 SGF29Q96ES7 293 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 ZNF778Q96MU6 729 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 NAP1L3Q99457 506 aaPredicted RBP16.62■□□□□ 0.25
CD9-209ENST00000540891 SLC2A6Q9UGQ3 507 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 CRLS1Q9UJA2 301 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
CD9-209ENST00000540891 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
CD9-209ENST00000540891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 IGLV3-16A0A075B6K0 115 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 KIR2DS5A0A0G2JLQ3 304 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 A0A0G2JNG1 304 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 HEATR9A2RTY3 570 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 PMS2P1A4D2B8 440 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 OR51F1A6NGY5 319 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 KIR2DS3K7RE56 304 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 PHF2O75151 1096 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 KRT14P02533 472 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 ADRA1DP25100 572 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 CD1CP29017 333 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 ALDH4A1P30038 563 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms