RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 CCDC173Q0VFZ6 552 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 ITGA9Q13797 1035 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 CLPPQ16740 277 aaPredicted RBP18.88■□□□□ 0.61
RAB35-204ENST00000540803 INSCQ1MX18 579 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 ZNF574Q6ZN55 896 aaPredicted RBP18.88■□□□□ 0.61
RAB35-204ENST00000540803 LRRC69Q6ZNQ3 347 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 PIM3Q86V86 326 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 SLC13A5Q86YT5 568 aaPredicted RBP18.88■□□□□ 0.61
RAB35-204ENST00000540803 ZNF248Q8NDW4 579 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 OR4K2Q8NGD2 314 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 GDAP1Q8TB36 358 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 BRSK1Q8TDC3 778 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 CRELD1Q96HD1 420 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 TIMM29Q9BSF4 260 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 ARNT2Q9HBZ2 717 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
RAB35-204ENST00000540803 KCNK4Q9NYG8 393 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 KCTD3Q9Y597 815 aa18.88■□□□□ 0.61
RAB35-204ENST00000540803 ITGA2BP08514 1039 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 HOXB3P14651 431 aaPredicted RBP18.87■□□□□ 0.61
RAB35-204ENST00000540803 SLC2A4P14672 509 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 CSF2RBP32927 897 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 MLLT3P42568 568 aaPredicted RBP18.87■□□□□ 0.61
RAB35-204ENST00000540803 CFHR1Q03591 330 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 SQSTM1Q13501 440 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 RPS6KA1Q15418 735 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 OASLQ15646 514 aaKnown RBP18.87■□□□□ 0.61
RAB35-204ENST00000540803 PHF19Q5T6S3 580 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 GPRC6AQ5T6X5 926 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 C11orf96Q7Z7L8 435 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 CLEC14AQ86T13 490 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 SPACA3Q8IXA5 215 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 DDHD1Q8NEL9 900 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 RTP4Q96DX8 246 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 NAF1Q96HR8 494 aaKnown RBP18.87■□□□□ 0.61
RAB35-204ENST00000540803 SLC38A3Q99624 504 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 OSGEPL1Q9H4B0 414 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 SMOXQ9NWM0 555 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 FEZ2Q9UHY8 353 aaPredicted RBP18.87■□□□□ 0.61
RAB35-204ENST00000540803 FKBPLQ9UIM3 349 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 DNAJC16Q9Y2G8 782 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 LOXL2Q9Y4K0 774 aa18.87■□□□□ 0.61
RAB35-204ENST00000540803 PTPRQQ9UMZ3 2332 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 KIR2DS5A0A0G2JLQ3 304 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 A0A0G2JNG1 304 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 OR5K4A6NMS3 321 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 KIR2DS3K7RE56 304 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 AGRPO00253 132 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 LIASO43766 372 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 PRAMEF1O95521 474 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 ZNF140P52738 457 aaPredicted RBP18.86■□□□□ 0.61
RAB35-204ENST00000540803 CTSCP53634 463 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 GPLD1P80108 840 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 NFATC2Q13469 925 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 GTF2H3Q13889 308 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 KIR2DS5Q14953 304 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 C16orf72Q14CZ0 275 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 P3H1Q32P28 736 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 LDLRAP1Q5SW96 308 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 SLC9B2Q86UD5 537 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 TRAPPC5Q8IUR0 188 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 RASGEF1AQ8N9B8 481 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 OR13C4Q8NGS5 318 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 ZNF398Q8TD17 642 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 ALS2CR12Q96Q35 445 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 FRMD8P1Q9BZ68 369 aaPredicted RBP18.86■□□□□ 0.61
RAB35-204ENST00000540803 STN1Q9H668 368 aaKnown RBP18.86■□□□□ 0.61
RAB35-204ENST00000540803 SCHIP1Q9P0W5 487 aaPredicted RBP18.86■□□□□ 0.61
RAB35-204ENST00000540803 CPNE7Q9UBL6 633 aa18.86■□□□□ 0.61
RAB35-204ENST00000540803 IGHV5-10-1A0A0J9YXX1 117 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 SRP72O76094 671 aaKnown RBP18.85■□□□□ 0.61
RAB35-204ENST00000540803 CRTAMO95727 393 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 LIMK2P53671 638 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 UBE2IP63279 158 aaKnown RBP18.85■□□□□ 0.61
RAB35-204ENST00000540803 XIAPP98170 497 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 TLE3Q04726 772 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 PDZD3Q86UT5 571 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 C1orf54Q8WWF1 131 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 TMEM159Q96B96 161 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 LRRC45Q96CN5 670 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 CCDC74BQ96LY2 380 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 TTC25Q96NG3 672 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 ZCCHC2Q9C0B9 1178 aaKnown RBP18.85■□□□□ 0.61
RAB35-204ENST00000540803 LRRC40Q9H9A6 602 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 TMEM9Q9P0T7 183 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 PISDQ9UG56 409 aa18.85■□□□□ 0.61
RAB35-204ENST00000540803 LDB2O43679 373 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 AP2A1O95782 977 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 JMJD7P0C870 316 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 THRAP10827 490 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 ITIH1P19827 911 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 STIP1P31948 543 aaKnown RBP18.84■□□□□ 0.61
RAB35-204ENST00000540803 ETV5P41161 510 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 PDE1BQ01064 536 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 SIX1Q15475 284 aaPredicted RBP18.84■□□□□ 0.61
RAB35-204ENST00000540803 SEPT7Q16181 437 aaKnown RBP18.84■□□□□ 0.61
RAB35-204ENST00000540803 TAB3Q8N5C8 712 aaPredicted RBP18.84■□□□□ 0.61
RAB35-204ENST00000540803 RCBTB1Q8NDN9 531 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 OR4D9Q8NGE8 314 aa18.84■□□□□ 0.61
RAB35-204ENST00000540803 KCNE4Q8WWG9 221 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms