RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 CHIT1Q13231 466 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 MINDY4Q4G0A6 757 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 ADGRD1Q6QNK2 874 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 ADAMTS15Q8TE58 950 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 PPP1R14AQ96A00 147 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 CYP2S1Q96SQ9 504 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
USP3-204ENST00000540797 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 C4BP0C0L5 1744 aa13.99□□□□□ -0.17
USP3-204ENST00000540797 TK2O00142 265 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 MTHFRP42898 656 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ASMTP46597 345 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 CLCQ05315 142 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ZYG11AQ6WRX3 759 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 PYDC1Q8WXC3 89 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 PRICKLE1Q96MT3 831 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 EBF3Q9H4W6 596 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 EQTNQ9NQ60 294 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 MYL12BO14950 172 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 SCN2BO60939 215 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ITPKBP27987 946 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 C2orf80Q0P641 193 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ALYREFQ86V81 257 aaKnown RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 CMASQ8NFW8 434 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 PHF10Q8WUB8 498 aaKnown RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 FNDC11Q9BVV2 318 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 PCBD2Q9H0N5 130 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ACSS2Q9NR19 701 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 PCDHGB3Q9Y5G1 929 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 CRYBG1Q9Y4K1 1723 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 IRS2Q9Y4H2 1338 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 COL2A1P02458 1487 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 CHRNA1P02708 482 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 XKR4Q5GH76 650 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 CDC73Q6P1J9 531 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ARMC8Q8IUR7 673 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 OFCC1Q8IZS5 231 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 MPP5Q8N3R9 675 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 SLC24A3Q9HC58 644 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 GPR32O75388 356 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 METTL18O95568 372 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 CLPTM1O96005 669 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 ALPIP09923 528 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 NT5EP21589 574 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 BNIP2Q12982 314 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 CRELD2Q6UXH1 353 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 DHDDSQ86SQ9 333 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 UNC5BQ8IZJ1 945 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 OR13C4Q8NGS5 318 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 PLEKHO2Q8TD55 490 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 TWIST2Q8WVJ9 160 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
USP3-204ENST00000540797 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 DDX18Q9NVP1 670 aaKnown RBP13.98□□□□□ -0.17
USP3-204ENST00000540797 TTC24A2A3L6 582 aaPredicted RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 J3KR12 359 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 FGFR3P22607 806 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 IDH2P48735 452 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 GHRHRQ02643 423 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 TNK2Q07912 1038 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 FOXM1Q08050 763 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 CPNE8Q86YQ8 564 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 DCBLD1Q8N8Z6 715 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 ZMAT2Q96NC0 199 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 FBXL12Q9NXK8 326 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 CCDC162PA2VCL2 907 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 EDF1O60869 148 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 ANXA4P09525 319 aaPredicted RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 HOXB2P14652 356 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 CCNFP41002 786 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 PTGIRP43119 386 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 LCP2Q13094 533 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 LRRC32Q14392 662 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 OVCA2Q8WZ82 227 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 RNFT2Q96EX2 444 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 BTBD1Q9H0C5 482 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 SUCOQ9UBS9 1254 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 ACP5P13686 325 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 CDC42P60953 191 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 LY6G5CQ5SRR4 150 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 ZNF248Q8NDW4 579 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
USP3-204ENST00000540797 AGAP2Q99490 1192 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 HSD3B7Q9H2F3 369 aa13.97□□□□□ -0.17
USP3-204ENST00000540797 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms