RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SKIV2L2P42285 1042 aaKnown RBP24.26■■□□□ 1.47
TTC3-225ENST00000540756 NSG1P42857 185 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 IL2P60568 153 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 SATB1Q01826 763 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 ARL13AQ5H913 290 aaPredicted RBP24.26■■□□□ 1.47
TTC3-225ENST00000540756 MACC1Q6ZN28 852 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 LSMEM2Q8N112 164 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 COQ10AQ96MF6 247 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 NCKIPSDQ9NZQ3 722 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 SERGEFQ9UGK8 458 aa24.26■■□□□ 1.47
TTC3-225ENST00000540756 IGLV3-16A0A075B6K0 115 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 C1QTNF3-AMACRE9PGA6 284 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 BTN3A1O00481 513 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 NEMP1O14524 444 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 NARSO43776 548 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 IPO13O94829 963 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 HSPA4LO95757 839 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 PRKAA2P54646 552 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 CAMK2GQ13555 558 aaPredicted RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 FAM219BQ5XKK7 198 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 PIWIL4Q7Z3Z4 852 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 MAVSQ7Z434 540 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 DSG4Q86SJ6 1040 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 PIWIL2Q8TC59 973 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 KIAA1191Q96A73 305 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 SLC6A17Q9H1V8 727 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 TFB2MQ9H5Q4 396 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 USH1CQ9Y6N9 552 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 K7ESM1 405 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 WNT9AO14904 365 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 ARFIP2P53365 341 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 AQP5P55064 265 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 SMAD4Q13485 552 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 FBXO48Q5FWF7 155 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 TMEM196Q5HYL7 178 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 PIP5KL1Q5T9C9 394 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 SPATS2Q86XZ4 545 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 NKAPQ8N5F7 415 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 TRAM1L1Q8N609 369 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 SREK1Q8WXA9 508 aaKnown RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 AP2M1Q96CW1 435 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 DRC3Q9H069 523 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 RSPH9Q9H1X1 276 aaPredicted RBP24.25■■□□□ 1.47
TTC3-225ENST00000540756 NUMA1Q14980 2115 aa24.25■■□□□ 1.47
TTC3-225ENST00000540756 TMEM114B3SHH9 223 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 ADAM23O75077 832 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 C6P13671 934 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 MPSTP25325 297 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 FUBP1Q96AE4 644 aaKnown RBP24.24■■□□□ 1.47
TTC3-225ENST00000540756 ULK4Q96C45 1275 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 EBF4Q9BQW3 602 aa24.24■■□□□ 1.47
TTC3-225ENST00000540756 LRRC14BA6NHZ5 514 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 RECQL5O94762 991 aaPredicted RBP24.23■■□□□ 1.47
TTC3-225ENST00000540756 AKT1P31749 480 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 DNAJB13P59910 316 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 ELP6Q0PNE2 266 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 RCN2Q14257 317 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 CST6Q15828 149 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 ACSBG2Q5FVE4 666 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 UGT3A1Q6NUS8 523 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 IL17RCQ8NAC3 791 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 RHEBL1Q8TAI7 183 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 PPP4R1Q8TF05 950 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 DTD2Q96FN9 168 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 HDAC8Q9BY41 377 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 MKRN2Q9H000 416 aaKnown RBP24.23■■□□□ 1.47
TTC3-225ENST00000540756 SMOXQ9NWM0 555 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 H0Y858 1186 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 INPP4BO15327 924 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 H2AFYO75367 372 aaKnown RBP24.23■■□□□ 1.47
TTC3-225ENST00000540756 SIX3O95343 332 aaPredicted RBP24.23■■□□□ 1.47
TTC3-225ENST00000540756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.23■■□□□ 1.47
TTC3-225ENST00000540756 INPP5DQ92835 1189 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 ZSCAN5AQ9BUG6 496 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 RNF112Q9ULX5 631 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 FADS3Q9Y5Q0 445 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 TRPM6Q9BX84 2022 aa24.23■■□□□ 1.47
TTC3-225ENST00000540756 NCF1BA6NI72 391 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 NCF1CA8MVU1 366 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 SYNCRIPO60506 623 aaKnown RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 SOD1P00441 154 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 NCF1P14598 390 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 TSPAN8P19075 237 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 COPAP53621 1224 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 TAS2R38P59533 333 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 ATP6V0D1P61421 351 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 PFKFB4Q16877 469 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 ZNF284Q2VY69 593 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 VWA5B1Q5TIE3 1220 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 BEND7Q8N7W2 519 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 STAG3L4Q8TBR4 150 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 NFKBIL1Q9UBC1 381 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 PSMD11O00231 422 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 ZNF195O14628 629 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 SGTAO43765 313 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 KERAO60938 352 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 ATP1B2P14415 290 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 COL9A1P20849 921 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 CCR7P32248 378 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 HK3P52790 923 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms