RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TPD52L2O43399 206 aaKnown RBP3.38□□□□□ -1.87
MDM2-227ENST00000540709 EXTL3O43909 919 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 PAGE4O60829 102 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 IPO7O95373 1038 aaKnown RBP3.38□□□□□ -1.87
MDM2-227ENST00000540709 EPHA2P29317 976 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 PIK3CAP42336 1068 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 RPL7AP62424 266 aaKnown RBP3.38□□□□□ -1.87
MDM2-227ENST00000540709 ZC2HC1CQ53FD0 456 aaPredicted RBP3.38□□□□□ -1.87
MDM2-227ENST00000540709 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 FAM149B1Q96BN6 582 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 WDFY2Q96P53 400 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 AGXT2Q9BYV1 514 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 POLR1BQ9H9Y6 1135 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 SCPEP1Q9HB40 452 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 CWC15Q9P013 229 aaKnown RBP3.38□□□□□ -1.87
MDM2-227ENST00000540709 B3GALT5Q9Y2C3 310 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 KDM3AQ9Y4C1 1321 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 A0A0G2JNG1 304 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 FAM237BA0A1B0GVD1 139 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 A0A1W2PP11 408 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 A0A1W2PPI3 338 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 A0A1W2PRG0 241 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 KANSL1LA0AUZ9 987 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 C5orf60A6NFR6 353 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 NPIPB15A6NHN6 443 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 A6NL46 340 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 H0YIN7 160 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 PSMD14O00487 310 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 PLPP2O43688 288 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 BUD23O43709 281 aaKnown RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 PDE9AO76083 593 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ICAM1P05362 532 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ATP1A3P13637 1013 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 HOXA13P31271 388 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 CASP6P55212 293 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 GNB1P62873 340 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 CSTF3Q12996 717 aaKnown RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 KIR2DS5Q14953 304 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 DUOXA1Q1HG43 343 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 NDUFAF5Q5TEU4 345 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 FAM53AQ6NSI3 398 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 INO80CQ6PI98 192 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 PACS1Q6VY07 963 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 SH2D5Q6ZV89 423 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 CPLX4Q7Z7G2 160 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 MYPOPQ86VE0 399 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 APLFQ8IW19 511 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 SMC5Q8IY18 1101 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 FRMD1Q8N878 549 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 TMEM116Q8NCL8 245 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 GSDMBQ8TAX9 411 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 WDR20Q8TBZ3 569 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ZNF473Q8WTR7 871 aaKnown RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 SEMA4DQ92854 862 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ANKRD9Q96BM1 317 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 SEMA6AQ9H2E6 1030 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 ZBTB20Q9HC78 741 aaPredicted RBP3.37□□□□□ -1.87
MDM2-227ENST00000540709 PREBQ9HCU5 417 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 RRP7BPQ9NSQ0 103 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 FLT1P17948 1338 aa3.37□□□□□ -1.87
MDM2-227ENST00000540709 NR5A2O00482 541 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 SH2B2O14492 632 aaPredicted RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 ZNF821O75541 412 aaPredicted RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 IGLV1-44P01699 117 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 GALCP54803 685 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 TMEM187Q14656 261 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 ZSCAN23Q3MJ62 389 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 ZFP69Q49AA0 526 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 FFAR4Q5NUL3 377 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 CYP20A1Q6UW02 462 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 STXBP4Q6ZWJ1 553 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 ATG9AQ7Z3C6 839 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 DIS3L2Q8IYB7 885 aaKnown RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 PM20D2Q8IYS1 436 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 C1orf52Q8N6N3 182 aaKnown RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 SENP5Q96HI0 755 aaPredicted RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 ART5Q96L15 291 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 TMEM39BQ9GZU3 492 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 APOBEC3GQ9HC16 384 aaKnown RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 ECHDC1Q9NTX5 307 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 ADPRHL2Q9NX46 363 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 OGFRQ9NZT2 677 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 DNAJB4Q9UDY4 337 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 LIMA1Q9UHB6 759 aaKnown RBP3.36□□□□□ -1.87
MDM2-227ENST00000540709 MMP24Q9Y5R2 645 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 NOTCH3Q9UM47 2321 aa3.36□□□□□ -1.87
MDM2-227ENST00000540709 C15orf62A8K5M9 175 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 NPHP1O15259 732 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 NDUFS3O75489 264 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 AGR2O95994 175 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 TSHBP01222 138 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 GNB3P16520 340 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 HOXC8P31273 242 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 ELF1P32519 619 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 RGS2P41220 211 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms