RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ZNF7P17097 686 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-212ENST00000540230 ALDH4A1P30038 563 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 RPL22P35268 128 aaKnown RBP14.85□□□□□ -0.03
UBE3B-212ENST00000540230 ITGA9Q13797 1035 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 LONRF2Q1L5Z9 754 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 AMZ1Q400G9 498 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 DRICH1Q6PGQ1 229 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-212ENST00000540230 IYDQ6PHW0 289 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 TRAPPC5Q8IUR0 188 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 PRELID2Q8N945 189 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 PRR11Q96HE9 360 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-212ENST00000540230 NUDT22Q9BRQ3 303 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 FAM96AQ9H5X1 160 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 ASB8Q9H765 288 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 RAB6BQ9NRW1 208 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-212ENST00000540230 PKD1L2Q7Z442 2459 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 OR2AG2A6NM03 316 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 KMOO15229 486 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 F3P13726 295 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 FDFT1P37268 417 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 FASLGP48023 281 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 CDKN1CP49918 316 aaPredicted RBP14.84□□□□□ -0.03
UBE3B-212ENST00000540230 CLCNKAP51800 687 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 NFATC2Q13469 925 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 SEMA5AQ13591 1074 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 SEPT6Q14141 434 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 SEPT7Q16181 437 aaKnown RBP14.84□□□□□ -0.03
UBE3B-212ENST00000540230 CCDC38Q502W7 563 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 LDLRAP1Q5SW96 308 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.84□□□□□ -0.03
UBE3B-212ENST00000540230 NKAIN2Q5VXU1 208 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 DET1Q7L5Y6 550 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 CCDC89Q8N998 374 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 TIMM29Q9BSF4 260 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 JRKLQ9Y4A0 524 aa14.84□□□□□ -0.03
UBE3B-212ENST00000540230 URB1O60287 2271 aaKnown RBP14.84□□□□□ -0.03
UBE3B-212ENST00000540230 DSPP15924 2871 aaKnown RBP14.83□□□□□ -0.03
UBE3B-212ENST00000540230 AGAP14A8MT82 685 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 PSMD3O43242 534 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 SGTAO43765 313 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 SUN1O94901 812 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 BRAFP15056 766 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 CD1CP29017 333 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 MC4RP32245 332 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 CSF2RBP32927 897 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 ARSDP51689 593 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 HHEXQ03014 270 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 CFHR1Q03591 330 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 BIRC2Q13490 618 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 GTF2H3Q13889 308 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 TMEM220Q6QAJ8 160 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF574Q6ZN55 896 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-212ENST00000540230 USP53Q70EK8 1073 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 SLITRK4Q8IW52 837 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 BEND7Q8N7W2 519 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-212ENST00000540230 LRRC45Q96CN5 670 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 TTC25Q96NG3 672 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 SEMA6CQ9H3T2 930 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 POLR1BQ9H9Y6 1135 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 EPB41L5Q9HCM4 733 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 PAK5Q9P286 719 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 DRG1Q9Y295 367 aaKnown RBP14.83□□□□□ -0.04
UBE3B-212ENST00000540230 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
UBE3B-212ENST00000540230 IGHV1OR21-1A0A087WYE8 117 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 PRAMEF33A0A0G2JMD5 474 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 HGFP14210 728 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 HOXB3P14651 431 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 RPL10P27635 214 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 AKT1P31749 480 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 LSSP48449 732 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 DRG2P55039 364 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 INHBCP55103 352 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 PDE1BQ01064 536 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ZFP36L1Q07352 338 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 FOXR1Q6PIV2 292 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 XKR5Q6UX68 686 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 FAM83HQ6ZRV2 1179 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 COG1Q8WTW3 980 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 MAIP1Q8WWC4 291 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 SGF29Q96ES7 293 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 NLE1Q9NVX2 485 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 TMEM9Q9P0T7 183 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF624Q9P2J8 865 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 WDR37Q9Y2I8 494 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 MROH6A6NGR9 719 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 OR51F1A6NGY5 319 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ERI2A8K979 691 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 PDZK1P1A8MUH7 402 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 E7EVH7 732 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 H7C0S8 307 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ZSCAN12O43309 604 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 POP7O75817 140 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CPNE6O95741 557 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms