RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 RIC8BQ9NVN3 520 aa10.07□□□□□ -0.8
SPARC-209ENST00000539687 THG1LQ9NWX6 298 aaKnown RBP10.07□□□□□ -0.8
SPARC-209ENST00000539687 DUS2Q9NX74 493 aaKnown RBP10.07□□□□□ -0.8
SPARC-209ENST00000539687 FBXO10Q9UK96 956 aa10.07□□□□□ -0.8
SPARC-209ENST00000539687 CCL26Q9Y258 94 aa10.07□□□□□ -0.8
SPARC-209ENST00000539687 MED16Q9Y2X0 877 aa10.07□□□□□ -0.8
SPARC-209ENST00000539687 HCFC2Q9Y5Z7 792 aa10.07□□□□□ -0.8
SPARC-209ENST00000539687 ZNF106Q9H2Y7 1883 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 DNAH12Q6ZR08 3092 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 NPEPPSL1A6NEC2 478 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 NPIPB15A6NHN6 443 aaPredicted RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 PSMD11O00231 422 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 PEX11AO75192 247 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 AP2A2O94973 939 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CLDN7O95471 211 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ESRRBO95718 433 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ENO2P09104 434 aaPredicted RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 UROSP10746 265 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 EEF1DP29692 281 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 GCKP35557 465 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CPOXP36551 454 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 MRPL19P49406 292 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 ACTR3P61158 418 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 AP2B1P63010 937 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ART3Q13508 389 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 PDGFRLQ15198 375 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 PCBP2Q15366 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
SPARC-209ENST00000539687 DHCR24Q15392 516 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 TSNQ15631 228 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 GSTA3Q16772 222 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 DUSP6Q16828 381 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 SLC5A9Q2M3M2 681 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 WLSQ5T9L3 541 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 C1orf146Q5VVC0 180 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 LRRC66Q68CR7 880 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ERAP2Q6P179 960 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CRTC1Q6UUV9 634 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 DPY19L3Q6ZPD9 716 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ADIPOR2Q86V24 386 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CPNE9Q8IYJ1 553 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 PGAM4Q8N0Y7 254 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 SIDT2Q8NBJ9 832 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 PDPRQ8NCN5 879 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 PPFIBP2Q8ND30 876 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 OR6K2Q8NGY2 324 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 TSPEARQ8WU66 669 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 ZNF707Q96C28 371 aaPredicted RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 DCUN1D1Q96GG9 259 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 RPL10LQ96L21 214 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 ZNF382Q96SR6 550 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 SLC25A23Q9BV35 468 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 MRPL1Q9BYD6 325 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 TRIM54Q9BYV2 358 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 UNKQ9C0B0 810 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 CIPCQ9C0C6 399 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 BRD9Q9H8M2 597 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 RDH14Q9HBH5 336 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 GDE1Q9NZC3 331 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CD274Q9NZQ7 290 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CLEC4EQ9ULY5 219 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 FNDC3AQ9Y2H6 1198 aaKnown RBP10.06□□□□□ -0.8
SPARC-209ENST00000539687 OARD1Q9Y530 152 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 CEP290O15078 2479 aa10.06□□□□□ -0.8
SPARC-209ENST00000539687 A0A0C4DFX4 3053 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 A0A1W2PPC1 479 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 UPK3BL1B0FP48 263 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 UPK3BL2E5RIL1 263 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 STK25O00506 426 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SLC16A5O15375 505 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 OR1I1O60431 355 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SKAP2O75563 359 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 CDK14O94921 469 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SLC25A14O95258 325 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 PSMG1O95456 288 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 TSPAN12O95859 305 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 OTCP00480 354 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 PRNPP04156 253 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 UGT2B4P06133 528 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 C8GP07360 202 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 CEBPBP17676 345 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 VCLP18206 1134 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 LBPP18428 481 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 IRS1P35568 1242 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 CTSOP43234 321 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 SPINT3P49223 89 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 STK19P49842 368 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 CDKN1CP49918 316 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 CCR3P51677 355 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 PGGT1BP53609 377 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 CDKL1Q00532 357 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 TBL3Q12788 808 aaKnown RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 SP140Q13342 867 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 FASTKQ14296 549 aaKnown RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 TGFBIQ15582 683 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 CHRNA6Q15825 494 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SETMARQ53H47 684 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms