RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CHST15Q7LFX5 561 aaPredicted RBP12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 TAF8Q7Z7C8 310 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 TMEM135Q86UB9 458 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 LRRTM4Q86VH4 590 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 GKN2Q86XP6 184 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 ZNF547Q8IVP9 402 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 OR4C6Q8NH72 309 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 BAHD1Q8TBE0 780 aaPredicted RBP12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 GPBAR1Q8TDU6 330 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 TTC25Q96NG3 672 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 COPS8Q99627 209 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 BOCQ9BWV1 1114 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 NLGN3Q9NZ94 848 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 RPS6KL1Q9Y6S9 549 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 ZNF292O60281 2723 aa12.55□□□□□ -0.4
TSPAN9-207ENST00000539631 WDR87Q6ZQQ6 2873 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 IGLV3-16A0A075B6K0 115 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ZCWPW2A0A1B0GU75 182 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ESYT3A0FGR9 886 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 DCDC2BA2VCK2 349 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 OR2AG2A6NM03 316 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 GOLGA8KD6RF30 607 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 GOLGA8TH3BQL2 631 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 TPP1O14773 563 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 CD3EAPO15446 510 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SIGLEC6O43699 453 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 USP1O94782 785 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 VAPBO95292 243 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 LDOC1O95751 146 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ALPPL2P10696 532 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 MYF5P13349 255 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ACP5P13686 325 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 CSRP1P21291 193 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ELK3P41970 407 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 DRG2P55039 364 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 PLTPP55058 493 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ILF3Q12906 894 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 KIAA0930Q6ICG6 404 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 TMEM220Q6QAJ8 160 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ZDHHC24Q6UX98 284 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 TRAPPC5Q8IUR0 188 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 ART4Q93070 314 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 DCUN1D1Q96GG9 259 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SGSM3Q96HU1 749 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 GSDMCQ9BYG8 508 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SLC32A1Q9H598 525 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 L2HGDHQ9H9P8 463 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 IL1RAPL1Q9NZN1 696 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 SLC23A2Q9UGH3 650 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 CHMP2BQ9UQN3 213 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 KCNK6Q9Y257 313 aa12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-207ENST00000539631 KNL1Q8NG31 2342 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 E7ESA3 106 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 GIPC1O14908 333 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 KMOO15229 486 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 SGTAO43765 313 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 POLBP06746 335 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 RALBP11234 206 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ATP1B2P14415 290 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PGAM1P18669 254 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PAMP19021 973 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ACTR1BP42025 376 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ACTR1AP61163 376 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PDIA2Q13087 525 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ITIH4Q14624 930 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 INSCQ1MX18 579 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 C11orf96Q7Z7L8 435 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 SFTPA2Q8IWL1 248 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 BEND7Q8N7W2 519 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 FAM46DQ8NEK8 389 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
TSPAN9-207ENST00000539631 HEXDCQ8WVB3 486 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms