RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NNMTP40261 264 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 RECQLP46063 649 aaPredicted RBP16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 MTTPP55157 894 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 LRRC8EQ6NSJ5 796 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 NAT14Q8WUY8 206 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 LPGAT1Q92604 370 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 SCRN2Q96FV2 425 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 KLHL32Q96NJ5 620 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 IGSF5Q9NSI5 407 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 INTS10Q9NVR2 710 aaKnown RBP16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 SLC27A6Q9Y2P4 619 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 DOCK8Q8NF50 2099 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 GOLGA8CPA6NN73 597 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZBTB14O43829 449 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 OR1I1O60431 355 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ADAM15Q13444 863 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 FAM45BPQ6NSW5 357 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 CRTC1Q6UUV9 634 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 FAM151BQ6UXP7 276 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 SFTPA1Q8IWL2 248 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 FAM45AQ8TCE6 357 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZNF641Q96N77 438 aaPredicted RBP16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 THG1LQ9NWX6 298 aaKnown RBP16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ELOVL2Q9NXB9 296 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 GALNT8Q9NY28 637 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 OBP2AQ9NY56 170 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 XPR1Q9UBH6 696 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 WASH3PC4AMC7 463 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 TXNDC9O14530 226 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 FDXRP22570 491 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 CA5AP35218 305 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 CHN2P52757 468 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 GRAMD1BQ3KR37 738 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ATAT1Q5SQI0 421 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 FBXL19Q6PCT2 694 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT2A3Q6UWM9 527 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 GDPD4Q6W3E5 623 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 TAS2R42Q7RTR8 314 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 ICA1LQ8NDH6 482 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 MOCOSQ96EN8 888 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 HIC2Q96JB3 615 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 BTBD9Q96Q07 612 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 TCF12Q99081 682 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 AARSD1Q9BTE6 412 aaKnown RBP16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 COG4Q9H9E3 785 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 DNAAF2Q9NVR5 837 aaKnown RBP16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 GTSE1Q9NYZ3 720 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 DEC1Q9P2X7 70 aa16.93■□□□□ 0.3
PCDHB17P-201ENST00000539533 TARM1B6A8C7 271 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 GAPDHSO14556 408 aaPredicted RBP16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 LEFTY1O75610 366 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 WISP3O95389 354 aaPredicted RBP16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 FOLH1Q04609 750 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 KLF10Q13118 480 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 ARSIQ5FYB1 569 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 EPGNQ6UW88 154 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 NAPRTQ6XQN6 538 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 SPATA24Q86W54 205 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 PLPP6Q8IY26 295 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 PIP4K2CQ8TBX8 421 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 UBXN10Q96LJ8 280 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 HEPHQ9BQS7 1158 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 RTKNQ9BST9 563 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 S1PR5Q9H228 398 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 BRD9Q9H8M2 597 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 ACSS2Q9NR19 701 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 E9PBE3 544 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 KLHL41O60662 606 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 CTSLP07711 333 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 BPIP17213 487 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 BMP8BP34820 402 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 OGFRL1Q5TC84 451 aaPredicted RBP16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 LRRC66Q68CR7 880 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 SATL1Q86VE3 508 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 WFIKKN2Q8TEU8 576 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 SGF29Q96ES7 293 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 BIRC8Q96P09 236 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 LYSMD1Q96S90 227 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 KXD1Q9BQD3 176 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 CDH19Q9H159 772 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 IL26Q9NPH9 171 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 OXSMQ9NWU1 459 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 FAM50BQ9Y247 325 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 MED16Q9Y2X0 877 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 SLC30A1Q9Y6M5 507 aa16.92■□□□□ 0.3
PCDHB17P-201ENST00000539533 SMIM31A0A1B0GVY4 71 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 AP1G1O43747 822 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 PRAMEF1O95521 474 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 APOA4P06727 396 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SRPRAP08240 638 aaKnown RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 HOXB8P17481 243 aaPredicted RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 LHCGRP22888 699 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 TTPAP49638 278 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SH3BGRP55822 239 aaPredicted RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 CACNG1Q06432 222 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms