RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 FECHP22830 423 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 SPAM1P38567 509 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 TSPAN7P41732 249 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 XRCC4Q13426 336 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 ATP13A5Q4VNC0 1218 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 SNAP47Q5SQN1 464 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 CCDC181Q5TID7 509 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 ZDHHC20Q5W0Z9 365 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 WDR74Q6RFH5 385 aaPredicted RBP21.89■■□□□ 1.09
SCARB1-206ENST00000539320 GLT6D1Q7Z4J2 308 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 SGF29Q96ES7 293 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 SLC23A2Q9UGH3 650 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 TRHDEQ9UKU6 1024 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 TMPRSS11EQ9UL52 423 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 DNAJC16Q9Y2G8 782 aa21.89■■□□□ 1.09
SCARB1-206ENST00000539320 EPN1Q9Y6I3 576 aaPredicted RBP21.89■■□□□ 1.09
SCARB1-206ENST00000539320 MACROD2A1Z1Q3 448 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 EFCAB7A8K855 629 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 PDZK1P1A8MUH7 402 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 H7C0C1 242 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 ATP5OP48047 213 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 ATP1A2P50993 1020 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 RAB15P59190 212 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 COPS2P61201 443 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 GTF2H3Q13889 308 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 SLC1A5Q15758 541 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 TRAPPC5Q8IUR0 188 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 ZNF547Q8IVP9 402 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 GDAP1Q8TB36 358 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 BLOC1S5Q8TDH9 187 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 NCSTNQ92542 709 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 CALR3Q96L12 384 aaKnown RBP21.88■■□□□ 1.09
SCARB1-206ENST00000539320 TBC1D10AQ9BXI6 508 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 FSD1LQ9BXM9 530 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 SEMA4CQ9C0C4 833 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 GBA3Q9H227 469 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 OCIAD1Q9NX40 245 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 SLC39A1Q9NY26 324 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 PCDHGA4Q9Y5G9 962 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 B3GALT1Q9Y5Z6 326 aa21.88■■□□□ 1.09
SCARB1-206ENST00000539320 CFAP46Q8IYW2 2715 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 RCCD1A6NED2 376 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 PRR19A6NJB7 356 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 PJA2O43164 708 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 RBL1P28749 1068 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 ARSDP51689 593 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 LY6DQ14210 128 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 SEPT7Q16181 437 aaKnown RBP21.87■■□□□ 1.09
SCARB1-206ENST00000539320 ITPRIPL1Q6GPH6 555 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 ARHGAP22Q7Z5H3 698 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 TMTC1Q8IUR5 882 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 TRIM48Q8IWZ4 208 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 DTX3LQ8TDB6 740 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 ZCCHC2Q9C0B9 1178 aaKnown RBP21.87■■□□□ 1.09
SCARB1-206ENST00000539320 UCK1Q9HA47 277 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 IL26Q9NPH9 171 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 IL17CQ9P0M4 197 aa21.87■■□□□ 1.09
SCARB1-206ENST00000539320 SCHIP1Q9P0W5 487 aaPredicted RBP21.87■■□□□ 1.09
SCARB1-206ENST00000539320 MN1Q10571 1320 aaPredicted RBP21.86■■□□□ 1.09
SCARB1-206ENST00000539320 A8MU76 341 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 VIPP01282 170 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 XRCC1P18887 633 aaPredicted RBP21.86■■□□□ 1.09
SCARB1-206ENST00000539320 PTPN7P35236 360 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 GEMP55040 296 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 FAM151BQ6UXP7 276 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 TMEM26Q6ZUK4 368 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 CDKL3Q8IVW4 592 aaPredicted RBP21.86■■□□□ 1.09
SCARB1-206ENST00000539320 BMPERQ8N8U9 685 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 ACTL9Q8TC94 416 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 JPH3Q8WXH2 748 aaPredicted RBP21.86■■□□□ 1.09
SCARB1-206ENST00000539320 FERMT1Q9BQL6 677 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 ASPSCR1Q9BZE9 553 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 OSBPL8Q9BZF1 889 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 C10orf88Q9H8K7 445 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 POT1Q9NUX5 634 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 EFR3BQ9Y2G0 817 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 PCDHA3Q9Y5H8 950 aa21.86■■□□□ 1.09
SCARB1-206ENST00000539320 PIEZO2Q9H5I5 2752 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 GLYATL1P3A0A0U1RQE8 302 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 VCLP18206 1134 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 CTNNA2P26232 953 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 SLC19A1P41440 591 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 NAP1L1P55209 391 aaKnown RBP21.85■■□□□ 1.09
SCARB1-206ENST00000539320 OTUD4Q01804 1114 aaKnown RBP21.85■■□□□ 1.09
SCARB1-206ENST00000539320 CHRNA6Q15825 494 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 DCAF12Q5T6F0 453 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 ANKS6Q68DC2 871 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 ZSCAN1Q8NBB4 408 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 BRSK1Q8TDC3 778 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 TTC25Q96NG3 672 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 TEFMQ96QE5 360 aaKnown RBP21.85■■□□□ 1.09
SCARB1-206ENST00000539320 FICDQ9BVA6 458 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 RBSNQ9H1K0 784 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.85■■□□□ 1.097e-8■□□□□ 10.9
SCARB1-206ENST00000539320 KLHL3Q9UH77 587 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 REXO2Q9Y3B8 237 aaKnown RBP21.85■■□□□ 1.09
SCARB1-206ENST00000539320 PKP3Q9Y446 797 aa21.85■■□□□ 1.09
SCARB1-206ENST00000539320 GCN1Q92616 2671 aaKnown RBP21.84■■□□□ 1.09
SCARB1-206ENST00000539320 CCDC66A2RUB6 948 aa21.84■■□□□ 1.09
SCARB1-206ENST00000539320 BTNL10A8MVZ5 291 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms