RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SPATA22Q8NHS9 363 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 CATSPER2Q96P56 530 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 GPR63Q9BZJ6 419 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 SPO11Q9Y5K1 396 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 UTP20O75691 2785 aaKnown RBP12.33□□□□□ -0.44
VAMP1-206ENST00000538970 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 NKX2-8O15522 239 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 NDST3O95803 873 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 BRAFP15056 766 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 BPIP17213 487 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 PTPN3P26045 913 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 SLC19A1P41440 591 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 NOP2P46087 812 aaKnown RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 CCR10P46092 362 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 ABHD18Q0P651 414 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 CDC20Q12834 499 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 TEX44Q53QW1 395 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 TMEM26Q6ZUK4 368 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF547Q8IVP9 402 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 UNC5BQ8IZJ1 945 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 VPS35Q96QK1 796 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 EFHD1Q9BUP0 239 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 GLOD4Q9HC38 313 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 ABHD10Q9NUJ1 306 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 POT1Q9NUX5 634 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-206ENST00000538970 TMPRSS11EQ9UL52 423 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 DNAJC16Q9Y2G8 782 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
VAMP1-206ENST00000538970 A0A0A6YYK5 440 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 PDZK1P1A8MUH7 402 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 AURKAO14965 403 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TOX3O15405 576 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 VEGFDO43915 354 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 PMPCBO75439 489 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 UBXN7O94888 489 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 VIPP01282 170 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 PRKAR1AP10644 381 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TYRP1P17643 537 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 OAS2P29728 719 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 STAT5AP42229 794 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 CAPZBP47756 277 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 MAP7Q14244 749 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 PRKD1Q15139 912 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 ABRAXAS1Q6UWZ7 409 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 MFSD7Q6UXD7 560 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 C11orf96Q7Z7L8 435 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TRIM48Q8IWZ4 208 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 RHOT1Q8IXI2 618 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 STARD8Q92502 1023 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TEKT5Q96M29 485 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 SRPK1Q96SB4 655 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 CHP1Q99653 195 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TRIT1Q9H3H1 467 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF768Q9H5H4 540 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 DDX56Q9NY93 547 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 UBP1Q9NZI7 540 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 SLC30A1Q9Y6M5 507 aa12.31□□□□□ -0.44
VAMP1-206ENST00000538970 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
VAMP1-206ENST00000538970 OR52A4PA6NMU1 304 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CBFA2T2O43439 604 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 MFAP3LO75121 409 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CDK14O94921 469 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CD68P34810 354 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 HMGCLP35914 325 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CDKN2BP42772 138 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 SLC1A1P43005 524 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 DRG2P55039 364 aaKnown RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 TLE1Q04724 770 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 FOXM1Q08050 763 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 WASHC5Q12768 1159 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 GPR18Q14330 331 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 TCEAL1Q15170 157 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 TAZQ16635 292 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 ATP13A5Q4VNC0 1218 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 AGAP9Q5VTM2 703 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CCDC70Q6NSX1 233 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 KDELC1Q6UW63 502 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 WASH2PQ6VEQ5 465 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 PRSS42Q7Z5A4 293 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 PTRH1Q86Y79 214 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms