RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CDRT15L2	A8MXV6	281 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PPM1D	O15297	605 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RRP8	O43159	456 aa	Known RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LDB2	O43679	373 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SRP72	O76094	671 aa	Known RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PRAMEF1	O95521	474 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	METTL18	O95568	372 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GSTM1	P09488	218 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ACP5	P13686	325 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RBMS1	P29558	406 aa	Known RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GDF10	P55107	478 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MAZ	P56270	477 aa	Known RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	XIAP	P98170	497 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GSTM4	Q03013	218 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	HHEX	Q03014	270 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NFATC2	Q13469	925 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BIRC2	Q13490	618 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SEMA5A	Q13591	1074 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SIX1	Q15475	284 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CHRNA6	Q15825	494 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LONRF2	Q1L5Z9	754 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FAM182A	Q5T1J6	154 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GPRC6A	Q5T6X5	926 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	WDR74	Q6RFH5	385 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SNX20	Q7Z614	316 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF547	Q8IVP9	402 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BEND7	Q8N7W2	519 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF248	Q8NDW4	579 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR4K2	Q8NGD2	314 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR4D9	Q8NGE8	314 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ATXN7L3B	Q96GX2	97 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PRR11	Q96HE9	360 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SGSM3	Q96HU1	749 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LINC00615	Q96LM1	132 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CMKLR1	Q99788	373 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FAM118B	Q9BPY3	351 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	DPH1	Q9BZG8	443 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	POT1	Q9NUX5	634 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF148	Q9UQR1	794 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PLEKHM1	Q9Y4G2	1056 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ARL5A	Q9Y689	179 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CFAP47	Q6ZTR5	3102 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	IGLV3-16	A0A075B6K0	115 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TRBV5-4	A0A0C4DH59	114 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MROH6	A6NGR9	719 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PLD2	O14939	933 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZSCAN12	O43309	604 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GAS8	O95995	478 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC4A1	P02730	911 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RALB	P11234	206 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ITGAL	P20701	1170 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	IDS	P22304	550 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MSN	P26038	577 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CD1C	P29017	333 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LIMK2	P53671	638 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PCBP4	P57723	403 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UBE2I	P63279	158 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CDK16	Q00536	496 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CDH17	Q12864	832 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TCEA2	Q15560	299 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	INSC	Q1MX18	579 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BCL7A	Q4VC05	210 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	KHDC1	Q4VXA5	237 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TMEM71	Q6P5X7	295 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FAM151B	Q6UXP7	276 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RAB11FIP2	Q7L804	512 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AMZ2	Q86W34	360 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RASGEF1C	Q8N431	466 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR10G6	Q8NH81	332 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GDAP1	Q8TB36	358 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZFPM2	Q8WW38	1151 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ANP32B	Q92688	251 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RANBP9	Q96S59	729 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NAP1L3	Q99457	506 aa	Predicted RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	EIF2B3	Q9NR50	452 aa	Known RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	KLC4	Q9NSK0	619 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NLE1	Q9NVX2	485 aa	Predicted RBP	12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CPNE7	Q9UBL6	633 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SATB2	Q9UPW6	733 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	KCNK6	Q9Y257	313 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SSUH2	Q9Y2M2	353 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RAX	Q9Y2V3	346 aa		12.12	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZFYVE26	Q68DK2	2539 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	C17orf113	A0A1B0GUU1	675 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828		A0A1W2PNU3	283 aa	Predicted RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CFAP99	D6REC4	459 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828		F5H423	210 aa	Predicted RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CES2	O00748	559 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NVL	O15381	856 aa	Known RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TLX3	O43711	291 aa	Predicted RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	DUX1	O43812	170 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FGG	P02679	453 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MPO	P05164	745 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MSH3	P20585	1137 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CD82	P27701	267 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ALDH4A1	P30038	563 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SKIDA1	Q1XH10	827 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MAP9	Q49MG5	647 aa		12.11	□□□□□ -0.47

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