RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TRAP1Q12931 704 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 TRNT1Q96Q11 434 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 GPER1Q99527 375 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 TCAF1Q9Y4C2 921 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 IQCF5A8MTL0 148 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 G3V2T6 193 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 FFAR2O15552 330 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 LRCH4O75427 683 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 AQP1P29972 269 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 CTSKP43235 329 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 POLR2JP52435 117 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 ITGADQ13349 1161 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 UBXN2BQ14CS0 331 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 PDK3Q15120 406 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 B3GNT6Q6ZMB0 384 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 ADCY4Q8NFM4 1077 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 SLC44A1Q8WWI5 657 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 PNPLA3Q9NST1 481 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 HCN3Q9P1Z3 774 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 MBD2Q9UBB5 411 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 HMGXB4Q9UGU5 601 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 ANPEPP15144 967 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 FAM129CQ86XR2 697 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 DBF4BQ8NFT6 615 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 RTKNQ9BST9 563 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 PCBD2Q9H0N5 130 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 OSER1Q9NX31 292 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 CORO1CQ9ULV4 474 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 OR1F1O43749 312 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 TMPRSS11AQ6ZMR5 421 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 HID1Q8IV36 788 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 HMCESQ96FZ2 354 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 ST6GALNAC4Q9H4F1 302 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 CCDC182A6NF36 153 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 SERPINA1P01009 418 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 MPSTP25325 297 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 PTPN5P54829 565 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 IL10RBQ08334 325 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 FAM92BQ6ZTR7 304 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 SERPINA9Q86WD7 417 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 OMA1Q96E52 524 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 NPAS2Q99743 824 aa16.68■□□□□ 0.26
SCARB1-205ENST00000538291 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
SCARB1-205ENST00000538291 CYP4B1P13584 511 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 GNSP15586 552 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 NR1H2P55055 460 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 QPRTQ15274 297 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 COX4I2Q96KJ9 171 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 LRRC4CQ9HCJ2 640 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 COPS7AQ9UBW8 275 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 RBMXL2O75526 392 aaKnown RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 PRKCZQ05513 592 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 ATP6V1C2Q8NEY4 427 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 NXNL1Q96CM4 212 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 SRMSQ9H3Y6 488 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 ZNF304Q9HCX3 659 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 CNOT6Q9ULM6 557 aaKnown RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 HEBP2Q9Y5Z4 205 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 ASLP04424 464 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 MNDAP41218 407 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 TMEM220Q6QAJ8 160 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 MON1BQ7L1V2 547 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 HPS6Q86YV9 775 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 GJD3Q8N144 294 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 PNPT1Q8TCS8 783 aaKnown RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 TWIST2Q8WVJ9 160 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 KLHL32Q96NJ5 620 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 SLCO1B3Q9NPD5 702 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 CA12O43570 354 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 HSPA7P48741 367 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 EVX2Q03828 476 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 LENG1Q96BZ8 264 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-205ENST00000538291 GAL3ST4Q96RP7 486 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 SLC17A7Q9P2U7 560 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 PLLPQ9Y342 182 aa16.67■□□□□ 0.26
SCARB1-205ENST00000538291 PSMD11O00231 422 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 SIN3BO75182 1162 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 MAT2AP31153 395 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PIK3R6Q5UE93 754 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 SLC34A3Q8N130 599 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 NEUROD4Q9HD90 331 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 EDF1O60869 148 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 UBXN7O94888 489 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 FOXM1Q08050 763 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 MYBPC3Q14896 1274 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 CROCCP3Q8IVE0 287 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 DPEP3Q9H4B8 488 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 MCUBQ9NWR8 336 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms