RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PRRC2CQ9Y520 2896 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 SDK2Q58EX2 2172 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 TRBV5-4A0A0C4DH59 114 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 GLYATL1P3A0A0U1RQE8 302 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 D6RAR5 112 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 ZNF185O15231 689 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 STX7O15400 261 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 CEP104O60308 925 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SRP72O76094 671 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 CDK14O94921 469 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 IFNB1P01574 187 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 MPOP05164 745 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RPLP0P05388 317 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 CSF2RBP32927 897 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SLC19A1P41440 591 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 FASLGP48023 281 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 CLCNKAP51800 687 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 UBE2IP63279 158 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 SEMA5AQ13591 1074 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 LRP8Q14114 963 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 POU6F1Q14863 301 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 CLCA4Q14CN2 919 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 CCDC38Q502W7 563 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RBM44Q6ZP01 1051 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 USP53Q70EK8 1073 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 ZNF534Q76KX8 674 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SLITRK4Q8IW52 837 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 LILRA3Q8N6C8 439 aaPredicted RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 OR13J1Q8NGT2 312 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 GLMNQ92990 594 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SGF29Q96ES7 293 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 NUDT22Q9BRQ3 303 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 NRSN2Q9GZP1 204 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 ABCG4Q9H172 646 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SEMA6CQ9H3T2 930 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RDH14Q9HBH5 336 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 CASS4Q9NQ75 786 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RAD18Q9NS91 495 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 KLC4Q9NSK0 619 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SMOXQ9NWM0 555 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPARC-208ENST00000538026 TMEM9Q9P0T7 183 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 RALYQ9UKM9 306 aaKnown RBP8.28□□□□□ -1.08
SPARC-208ENST00000538026 ZNF148Q9UQR1 794 aa8.28□□□□□ -1.08
SPARC-208ENST00000538026 IGLV3-16A0A075B6K0 115 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 IGHV1OR21-1A0A087WYE8 117 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 CCDC78A2IDD5 438 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 OR51F1A6NGY5 319 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 H7C0S8 307 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 VEGFDO43915 354 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 PPFIA2O75334 1257 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TCEA3O75764 348 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 POP7O75817 140 aaKnown RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 STK10O94804 968 aaKnown RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 PRAMEF1O95521 474 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 HGFP14210 728 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 ZNF7P17097 686 aaPredicted RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 ETV5P41161 510 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 LSSP48449 732 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 NFATC2Q13469 925 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 CYP1B1Q16678 543 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 ANKRD22Q5VYY1 191 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TMEM220Q6QAJ8 160 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 ABRAXAS1Q6UWZ7 409 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 PHYKPLQ8IUZ5 450 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 OR6C4Q8NGE1 309 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 CRELD1Q96HD1 420 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 ALS2CR12Q96Q35 445 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 NRTNQ99748 197 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TIMM29Q9BSF4 260 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TBC1D10AQ9BXI6 508 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 AP1M1Q9BXS5 423 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 ASB8Q9H765 288 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 LRRC40Q9H9A6 602 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 RAB6BQ9NRW1 208 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 NLE1Q9NVX2 485 aaPredicted RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TTC7AQ9ULT0 858 aaPredicted RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 SATB2Q9UPW6 733 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 PKP3Q9Y446 797 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 JRKLQ9Y4A0 524 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 SLC30A1Q9Y6M5 507 aa8.27□□□□□ -1.09
SPARC-208ENST00000538026 TLN1Q9Y490 2541 aaKnown RBP8.27□□□□□ -1.09
SPARC-208ENST00000538026 IGHV5-10-1A0A0J9YXX1 117 aa8.26□□□□□ -1.09
SPARC-208ENST00000538026 CCDC162PA2VCL2 907 aa8.26□□□□□ -1.09
SPARC-208ENST00000538026 OR2AG2A6NM03 316 aa8.26□□□□□ -1.09
SPARC-208ENST00000538026 OR52A4PA6NMU1 304 aa8.26□□□□□ -1.09
SPARC-208ENST00000538026 C2orf81A6NN90 581 aa8.26□□□□□ -1.09
SPARC-208ENST00000538026 CDRT15L2A8MXV6 281 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms