RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 UNC5BQ8IZJ1 945 aa19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SPATA22Q8NHS9 363 aa19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RNF25Q96BH1 459 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TIMM29Q9BSF4 260 aa19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SLC23A2Q9UGH3 650 aa19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TUBD1Q9UJT1 453 aa19.39■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PDZK1P1A8MUH7 402 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 VEGFDO43915 354 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 UBXN7O94888 489 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CDK14O94921 469 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 NDST3O95803 873 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 MT-CYBP00156 380 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 BPIP17213 487 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 AMD1P17707 334 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SLC19A1P41440 591 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 GFERP55789 205 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 DYNLT1P63172 113 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RELNP78509 3460 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SEPT7Q16181 437 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TEX44Q53QW1 395 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 C9orf72Q96LT7 481 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ANP32EQ9BTT0 268 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 GLOD4Q9HC38 313 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 DDX56Q9NY93 547 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 OGFRQ9NZT2 677 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ZNF624Q9P2J8 865 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 DNAJC16Q9Y2G8 782 aa19.38■□□□□ 0.69
TNFRSF1B-204ENST00000536782 A0A0A6YYK5 440 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TOX3O15405 576 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CBFA2T2O43439 604 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 MTX2O75431 263 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 DLGAP3O95886 979 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PRKAR1AP10644 381 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TYRP1P17643 537 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SLC1A1P43005 524 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 FOXM1Q08050 763 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CDC20Q12834 499 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 B4GALNT4Q76KP1 1039 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RHOT1Q8IXI2 618 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ESX1Q8N693 406 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CCDC42Q96M95 316 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 VPS35Q96QK1 796 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 POT1Q9NUX5 634 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SIDT1Q9NXL6 827 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SLC30A1Q9Y6M5 507 aa19.37■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ARHGAP6O43182 974 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PMPCBO75439 489 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TPM1P09493 284 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TNNT1P13805 278 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 IDSP22304 550 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PTPN3P26045 913 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 NR2C2P49116 596 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 MC1RQ01726 317 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 MAP7Q14244 749 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ABRAXAS1Q6UWZ7 409 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 WASH2PQ6VEQ5 465 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 BZW1Q7L1Q6 419 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PTRH1Q86Y79 214 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ZNF547Q8IVP9 402 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TEKT5Q96M29 485 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TGM7Q96PF1 710 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CHP1Q99653 195 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 NHEJ1Q9H9Q4 299 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 BPIFA1Q9NP55 256 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 WASH6PQ9NQA3 447 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ABHD10Q9NUJ1 306 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 UBP1Q9NZI7 540 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SPO11Q9Y5K1 396 aa19.36■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PRR19A6NJB7 356 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 AURKAO14965 403 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 VCLP18206 1134 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RPL10P27635 214 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 HMGCLP35914 325 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 STAT5AP42229 794 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SEPHS1P49903 392 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TLE1Q04724 770 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 GTF2H3Q13889 308 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 PRKD1Q15139 912 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 KHDC1Q4VXA5 237 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 AGAP9Q5VTM2 703 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 MFSD7Q6UXD7 560 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RBM12BQ8IXT5 1001 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 GDAP1Q8TB36 358 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TFB1MQ8WVM0 346 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 STARD8Q92502 1023 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 CXorf40BQ96DE9 158 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ULBP3Q9BZM4 244 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ZNF768Q9H5H4 540 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SLC40A1Q9NP59 571 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TMPRSS11EQ9UL52 423 aa19.35■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RASSF9O75901 435 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 BRAFP15056 766 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TCN2P20062 427 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 OAS2P29728 719 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 LEPRP48357 1165 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 DRG2P55039 364 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TMEM115Q12893 351 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TFDP2Q14188 446 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ATP13A5Q4VNC0 1218 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms