RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CD72P21854 359 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SERPINA4P29622 427 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GRIA2P42262 883 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CD151P48509 253 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CSNK1DP48730 415 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KPNA2P52292 529 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NAGLUP54802 743 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ST8SIA6P61647 398 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SH2D4BQ5SQS7 431 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TSTD2Q5T7W7 516 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 C16orf89Q6UX73 402 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 IZUMO2Q6UXV1 221 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CEP97Q8IW35 865 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DENND6AQ8IWF6 608 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PAF1Q8N7H5 531 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PIH1D2Q8WWB5 315 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MRPL57Q9BQC6 102 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MRPL46Q9H2W6 279 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 K7EQS6 105 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HTRA2O43464 458 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EGFP01133 1207 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EPOP01588 193 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LYNP07948 512 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CES1P23141 567 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PPARGP37231 505 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NNMTP40261 264 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC1A2P43004 574 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARSDP51689 593 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EPHB1P54762 984 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MPP1Q00013 466 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DLG1Q12959 904 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CTBP1Q13363 440 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARMC12Q5T9G4 340 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PIWIL4Q7Z3Z4 852 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KDM1BQ8NB78 822 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 OR13C4Q8NGS5 318 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RNF217Q8TC41 542 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NXNL1Q96CM4 212 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SCYL1Q96KG9 808 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DOCK9Q9BZ29 2069 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TMEM245Q9H330 911 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 XPR1Q9UBH6 696 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PLXNB3Q9ULL4 1909 aa12.84□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 OR51F1A6NGY5 319 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PEX1O43933 1283 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SOCS5O75159 536 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PDE5AO76074 875 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TIE1P35590 1138 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RECQLP46063 649 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TAS2R39P59534 338 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CNGA3Q16281 694 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HNRNPA1L2Q32P51 320 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HPS6Q86YV9 775 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZNF513Q8N8E2 541 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KYQ8NBH2 561 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CALML6Q8TD86 181 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC26A7Q8TE54 656 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PYDC1Q8WXC3 89 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DNAJC1Q96KC8 554 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KLHL32Q96NJ5 620 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SERPINI1Q99574 410 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SHCBP1LQ9BZQ2 653 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 WDR55Q9H6Y2 383 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MRGBPQ9NV56 204 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CDYLQ9Y232 598 aa12.83□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NUMA1Q14980 2115 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 HEATR9A2RTY3 570 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NPIPB15A6NHN6 443 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PLK4O00444 970 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 POP4O95707 220 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 EPHX1P07099 455 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ATP5F1P24539 256 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MAPK8P45983 427 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LEPRP48357 1165 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CYLC2Q14093 348 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 C9orf64Q5T6V5 341 aa12.83□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NEPROQ6NW34 567 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms