RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TIMM29Q9BSF4 260 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PADI1Q9ULC6 663 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SHOC2Q9UQ13 582 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RELNP78509 3460 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 C21orf140B9A014 251 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KCNK1O00180 336 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 VEGFDO43915 354 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SPAG6O75602 509 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CREG1O75629 220 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CDK14O94921 469 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MBD3O95983 291 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 JCHAINP01591 159 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FGF5P12034 268 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IL4RP24394 825 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RPL10P27635 214 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LEPRP48357 1165 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CD97P48960 835 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DCDC1P59894 354 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TPM4P67936 248 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PDE1BQ01064 536 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TUBB3Q13509 450 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PLCL1Q15111 1095 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PCSK7Q16549 785 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZNF648Q5T619 568 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FHL5Q5TD97 284 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RSC1A1Q92681 617 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 HDAC11Q96DB2 347 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SCHIP1Q9P0W5 487 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CTTNBP2NLQ9P2B4 639 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TRIM10Q9UDY6 481 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RARRES3Q9UL19 164 aa12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 G3BP2Q9UN86 482 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CLEC18AA5D8T8 446 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SERPING1P05155 500 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CYP1A2P05177 515 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PIRTP0C851 137 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC19A1P41440 591 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PGDP52209 483 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DRG2P55039 364 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GBE1Q04446 702 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 AP1B1Q10567 949 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GPR18Q14330 331 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ODF2Q5BJF6 829 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CLEC18BQ6UXF7 455 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ADGRG6Q86SQ4 1221 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CLEC18CQ8NCF0 446 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GPR26Q8NDV2 337 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 UBXN4Q92575 508 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BRD8Q9H0E9 1235 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ACTL8Q9H568 366 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LHX9Q9NQ69 397 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZNF624Q9P2J8 865 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PCDHGA6Q9Y5G7 932 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC30A1Q9Y6M5 507 aa12.75□□□□□ -0.37
TNFRSF1A-207ENST00000535958 A0A1B0GTH6 734 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 OR52A4PA6NMU1 304 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PPP1R12AO14974 1030 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CHUKO15111 745 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KIF1CO43896 1103 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MTX2O75431 263 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RECKO95980 971 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FURINP09958 794 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 NELFEP18615 380 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ANP32AP39687 249 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ACY1Q03154 408 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ATP13A4Q4VNC1 1196 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TTC30BQ8N4P2 665 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CPT1CQ8TCG5 803 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 THAP4Q8WY91 577 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MAGEE1Q9HCI5 957 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ACSS2Q9NR19 701 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 NFKBIL1Q9UBC1 381 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC23A2Q9UGH3 650 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
TNFRSF1A-207ENST00000535958 UBA6A0AVT1 1052 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms