RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PSMA3P25788 255 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PSMA4P25789 261 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 ARL1P40616 181 aaPredicted RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 CASP2P42575 452 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 HK3P52790 923 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ARF5P84085 180 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PRKCQQ04759 706 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TRAF2Q12933 501 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 LSAMPQ13449 338 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 COQ5Q5HYK3 327 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ADGRF1Q5T601 910 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 IFNEQ86WN2 208 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 DCBLD1Q8N8Z6 715 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 SLC43A3Q8NBI5 491 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 DIS3LQ8TF46 1054 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 C1orf50Q9BV19 199 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 SLC52A3Q9NQ40 469 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 GALNT8Q9NY28 637 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ATXN10Q9UBB4 475 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 A0A1B0GTW7 788 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 SNAP91O60641 907 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TMCC1O94876 653 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 OR4F21O95013 312 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 C1RP00736 705 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PRR35P0CG20 571 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 NELFEP18615 380 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 IL10P22301 178 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 FOXM1Q08050 763 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 GPNMBQ14956 572 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 LCN8Q6JVE9 175 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 CARM1Q86X55 608 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 TRIM54Q9BYV2 358 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ASB1Q9Y576 335 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 FAM149AA5PLN7 773 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 IQCF5A8MTL0 148 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 ARVCFO00192 962 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 ARPC2O15144 300 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 GPR39O43194 453 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 SLC22A3O75751 556 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 NR1H2P55055 460 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.32
LDLR-203ENST00000535915 UFM1P61960 85 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 RCAN2Q14206 197 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 MYBPC3Q14896 1274 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 FUT11Q495W5 492 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 XKR7Q5GH72 579 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 AARS2Q5JTZ9 985 aaKnown RBP13.02□□□□□ -0.32
LDLR-203ENST00000535915 CXorf57Q6NSI4 855 aaKnown RBP13.02□□□□□ -0.32
LDLR-203ENST00000535915 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 OR2T11Q8NH01 316 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 CDK15Q96Q40 435 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 TMEM175Q9BSA9 504 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 MRPL9Q9BYD2 267 aaKnown RBP13.02□□□□□ -0.32
LDLR-203ENST00000535915 RNF38Q9H0F5 515 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 PREBQ9HCU5 417 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 PADI4Q9UM07 663 aa13.02□□□□□ -0.32
LDLR-203ENST00000535915 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 CCDC154A6NI56 674 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 E2F3O00716 465 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 UGT1A6P19224 532 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 SOX11P35716 441 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 CLCN4P51793 760 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 CREB5Q02930 508 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 MAP7Q14244 749 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TGFBIQ15582 683 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TAF12Q16514 161 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 RABL3Q5HYI8 236 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 PAGE3Q5JUK9 113 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 SLC8B1Q6J4K2 584 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TTC30BQ8N4P2 665 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 FNDC5Q8NAU1 212 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TSPAN14Q8NG11 270 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 ZFP28Q8NHY6 868 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TSPEARQ8WU66 669 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 KCNJ9Q92806 393 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 WBP2Q969T9 261 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 MPP4Q96JB8 637 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 ALG2Q9H553 416 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms