RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RPS6KA6Q9UK32 745 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ING4Q9UNL4 249 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 SCGB1D2O95969 90 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 SSR2P43308 183 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 GDI2P50395 445 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 UBAP2Q5T6F2 1119 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 NET1Q7Z628 596 aaPredicted RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 LCA5LO95447 670 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 PRH1P02810 166 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 FOLH1Q04609 750 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 TNK2Q07912 1038 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 PLEKHG4Q58EX7 1191 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 INTS11Q5TA45 600 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 OR7D4Q8NG98 312 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 PPM1MQ96MI6 270 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 RNF121Q9H920 327 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ARHGEF33A8MVX0 844 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 XKRYO14609 159 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 LSM1O15116 133 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 GRM6O15303 877 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 LMO2P25791 158 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 DENND5AQ6IQ26 1287 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 MSANTD1Q6ZTZ1 278 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 GSTCDQ8NEC7 633 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 BRSK1Q8TDC3 778 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 MYDGFQ969H8 173 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 UBE2E3Q969T4 207 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ESAMQ96AP7 390 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ZNF224Q9NZL3 707 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 TRIM38O00635 465 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 TCF4P15884 667 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 MSX1P28360 303 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 GABRB2P47870 512 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ABRAXAS1Q6UWZ7 409 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 SYNPOQ8N3V7 929 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 CLEC4CQ8WTT0 213 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 GLOD4Q9HC38 313 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 A0A0G2JN53 185 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 TSPAN1O60635 241 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 UGT2B17O75795 530 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
SPG11-203ENST00000535302 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 ARNTL2Q8WYA1 636 aa12.54□□□□□ -0.4
SPG11-203ENST00000535302 A8MU76 341 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ITGB1P05556 798 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PRKCHP24723 683 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ADSSP30520 456 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLC7A2P52569 658 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 RAB25P57735 213 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 VLDLRP98155 873 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 CREMQ03060 361 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TAPT1Q6NXT6 567 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SNX20Q7Z614 316 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 RBFAQ8N0V3 343 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SIDT2Q8NBJ9 832 aaKnown RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 ITCHQ96J02 903 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ARL8BQ9NVJ2 186 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 KIDINS220Q9ULH0 1771 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 ARL5CA6NH57 179 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ACADLP28330 430 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TGFBR2P37173 567 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ATXN7L2Q5T6C5 722 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 METTL21CQ5VZV1 264 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLC22A8Q8TCC7 542 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SMG7Q92540 1137 aaKnown RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 YIPF4Q9BSR8 244 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 OR51V1Q9H2C8 321 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 DPEP2Q9H4A9 486 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PLEKHA1Q9HB21 404 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TRBC1P01850 177 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SMPD1P17405 629 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ARFIP1P53367 373 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 C2orf80Q0P641 193 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 MNTQ99583 582 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 GPR21Q99679 349 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 CRNNQ9UBG3 495 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 A0A0J9YYE9 177 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TSPAN4O14817 238 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TM4SF1P30408 202 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 CTSKP43235 329 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 INHBEP58166 350 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms