RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MMP8P22894 467 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 RGS8P57771 180 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 PPP2R2BQ00005 443 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 GRSF1Q12849 480 aaKnown RBP eCLIP18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 MAGEH1Q9H213 219 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 PLGRKTQ9HBL7 147 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 ING4Q9UNL4 249 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 EFR3BQ9Y2G0 817 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 U3KQV3 271 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 TAF4O00268 1085 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 OR1F1O43749 312 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 PLOD3O60568 738 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 SIN3BO75182 1162 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 TGDSO95455 350 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 DGKGP49619 791 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 PLD4Q96BZ4 506 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 GAL3ST4Q96RP7 486 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 FBXW2Q9UKT8 454 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 GLTPD2A6NH11 291 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 DMPKQ09013 629 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 SNAPC1Q16533 368 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 VITQ6UXI7 678 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 ARNTL2Q8WYA1 636 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 KREMEN1Q96MU8 473 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 NOL11Q9H8H0 719 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC17A7Q9P2U7 560 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 FCF1Q9Y324 198 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 CCNE2O96020 404 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 VARSP26640 1264 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 CRHR1P34998 444 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 PERM1Q5SV97 790 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 TRABD2AQ86V40 505 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 ARL14EPQ8N8R7 260 aaPredicted RBP18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 TWIST2Q8WVJ9 160 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 RBM18Q96H35 190 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 BHLHE41Q9C0J9 482 aaPredicted RBP18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 HCN3Q9P1Z3 774 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 CPQQ9Y646 472 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 A0A0U1RQJ8 604 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 RCCD1A6NED2 376 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 CHST10O43529 356 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 CASP9P55211 416 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 AP1S1P61966 158 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 S100ZQ8WXG8 99 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 PCDHB18PQ96TA0 734 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 INSIG1O15503 277 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 ARSHQ5FYA8 562 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 GPR107Q5VW38 600 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC26A9Q7LBE3 791 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 AGAP11Q8TF27 550 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 PDP1Q9P0J1 537 aaPredicted RBP18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 COPS7AQ9UBW8 275 aa18.02■□□□□ 0.48
SFSWAP-203ENST00000535236 ARL5CA6NH57 179 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 ENTPD5O75356 428 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 LGR5O75473 907 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 PGM3O95394 542 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 ITGA3P26006 1051 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 IL12BP29460 328 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 FAM81AQ8TBF8 368 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 ZCCHC10Q8TBK6 192 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 NXNL1Q96CM4 212 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 CAPNS2Q96L46 248 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 CLK4Q9HAZ1 481 aaKnown RBP18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 CHRAC1Q9NRG0 131 aa18.02■□□□□ 0.47
SFSWAP-203ENST00000535236 VPS26BQ4G0F5 336 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 GLYATQ6IB77 296 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 IQCF2Q8IXL9 164 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 ZMIZ2Q8NF64 920 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 OR7D4Q8NG98 312 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SLCO1B3Q9NPD5 702 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 OAS3Q9Y6K5 1087 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 RIIAD1A6NNX1 92 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 ZBTB11O95625 1053 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 IL12AP29459 219 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 CBFBQ13951 182 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC22A17Q8WUG5 538 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 TBATAQ96M53 351 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 PPM1MQ96MI6 270 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 WDR55Q9H6Y2 383 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 DHRS7Q9Y394 339 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 RSL1D1O76021 490 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 UROSP10746 265 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 RAB25P57735 213 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 OLR1P78380 273 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 FOLH1Q04609 750 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 FOXM1Q08050 763 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 AAGABQ6PD74 315 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 FOXR2Q6PJQ5 311 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 ZNF662Q6ZS27 426 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 FAM92BQ6ZTR7 304 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 WDR60Q8WVS4 1066 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 PMEPA1Q969W9 287 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 NIFKQ9BYG3 293 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC25A51Q9H1U9 297 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 TRMT13Q9NUP7 481 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 TIMM22Q9Y584 194 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 ARHGEF33A8MVX0 844 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 C4BPAP04003 597 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms