RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	MRPS26	Q9BYN8	205 aa	Known RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	OSER1	Q9NX31	292 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	FBXL12	Q9NXK8	326 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SLC7A4	O43246	635 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	B3GALT2	O43825	422 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ANXA4	P09525	319 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	NUDT17	P0C025	328 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ZCCHC18	P0CG32	403 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	EPHA3	P29320	983 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MYBPC1	Q00872	1141 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CHIT1	Q13231	466 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TAF5	Q15542	800 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TEAD2	Q15562	447 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ITPRIPL2	Q3MIP1	535 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GPR33	Q49SQ1	333 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	DDHD1	Q8NEL9	900 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GAL3ST4	Q96RP7	486 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TAPBPL	Q9BX59	468 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	C3orf18	Q9UK00	162 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CAPN1	P07384	714 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CTSO	P43234	321 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TSEN2	Q8NCE0	465 aa	Known RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	EXOSC8	Q96B26	276 aa	Known RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TRIM38	O00635	465 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ENPP3	O14638	875 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SNAI1	O95863	264 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ECD	O95905	644 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MT-CYB	P00156	380 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ADSS	P30520	456 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CASR	P41180	1078 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PRSS58	Q8IYP2	241 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ST13P5	Q8NFI4	369 aa	Predicted RBP	15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CCSER2	Q9H7U1	834 aa		15.6	■□□□□ 0.09
NCAPD3-213	ENST00000534532	RBM47	A0AV96	593 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GIMD1	P0DJR0	217 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ALDH4A1	P30038	563 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ST13	P50502	369 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MRPS22	P82650	360 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SNX20	Q7Z614	316 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GML	Q99445	158 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CDADC1	Q9BWV3	514 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GSDMC	Q9BYG8	508 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MRPS30	Q9NP92	439 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SEC14L3	Q9UDX4	400 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HSPA7	P48741	367 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TOP3A	Q13472	1001 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	DHDDS	Q86SQ9	333 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PEG10	Q86TG7	708 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SPRTN	Q9H040	489 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	IL23A	Q9NPF7	189 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CACNG4	Q9UBN1	327 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	FBXW2	Q9UKT8	454 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	WNT6	Q9Y6F9	365 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SQOR	Q9Y6N5	450 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PARP4	Q9UKK3	1724 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532		B4DGG1	531 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	CHRNA1	P02708	482 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	LPIN1	Q14693	890 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TIGD2	Q4W5G0	525 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PDZK1	Q5T2W1	519 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	BEND5	Q7L4P6	421 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	LDB1	Q86U70	411 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	IRF2BP1	Q8IU81	584 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	FAM98A	Q8NCA5	519 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PRKAB1	Q9Y478	270 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SPESP1	Q6UW49	350 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	APLF	Q8IW19	511 aa	Predicted RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SETD7	Q8WTS6	366 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ARHGAP39	Q9C0H5	1083 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SEMA6A	Q9H2E6	1030 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	NOL11	Q9H8H0	719 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	FNIP2	Q9P278	1114 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SCML2	Q9UQR0	700 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	COQ4	Q9Y3A0	265 aa		15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SAMHD1	Q9Y3Z3	626 aa	Known RBP	15.59	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PIAS1	O75925	651 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	RB1	P06400	928 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HAPLN1	P10915	354 aa	Predicted RBP	15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	ACP5	P13686	325 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	GNAZ	P19086	355 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SLC13A2	Q13183	592 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HEPACAM	Q14CZ8	416 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	TMEM192	Q8IY95	271 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MREG	Q8N565	214 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	FAM46D	Q8NEK8	389 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	HCAR2	Q8TDS4	363 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	SLC44A1	Q8WWI5	657 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	IGSF21	Q96ID5	467 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	JSRP1	Q96MG2	331 aa	Predicted RBP	15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	RHOBTB2	Q9BYZ6	727 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	OSBPL2	Q9H1P3	480 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	MYRF	Q9Y2G1	1151 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	PCDHGA11	Q9Y5H2	935 aa		15.58	■□□□□ 0.09
NCAPD3-213	ENST00000534532	BBIP1	A8MTZ0	92 aa		15.58	■□□□□ 0.08
NCAPD3-213	ENST00000534532	IL12B	P29460	328 aa		15.58	■□□□□ 0.08
NCAPD3-213	ENST00000534532	PRR5	P85299	388 aa		15.58	■□□□□ 0.08
NCAPD3-213	ENST00000534532	IZUMO1	Q8IYV9	350 aa		15.58	■□□□□ 0.08
NCAPD3-213	ENST00000534532	OR2AP1	Q8NGE2	309 aa		15.58	■□□□□ 0.08

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms