RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 VAT1Q99536 393 aa8.78□□□□□ -1
COPB1-211ENST00000534234 HEMGNQ9BXL5 484 aa8.78□□□□□ -1
COPB1-211ENST00000534234 EPB41L1Q9H4G0 881 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TRABDQ9H4I3 376 aa8.78□□□□□ -1
COPB1-211ENST00000534234 IL26Q9NPH9 171 aa8.78□□□□□ -1
COPB1-211ENST00000534234 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
COPB1-211ENST00000534234 ZNF624Q9P2J8 865 aaPredicted RBP8.78□□□□□ -1
COPB1-211ENST00000534234 KLHL3Q9UH77 587 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TMPRSS11EQ9UL52 423 aa8.78□□□□□ -1
COPB1-211ENST00000534234 ANKRD36A6QL64 1941 aa8.78□□□□□ -1
COPB1-211ENST00000534234 KALRNO60229 2985 aa8.78□□□□□ -1
COPB1-211ENST00000534234 F5H423 210 aaPredicted RBP8.78□□□□□ -1
COPB1-211ENST00000534234 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
COPB1-211ENST00000534234 AMD1P17707 334 aa8.78□□□□□ -1
COPB1-211ENST00000534234 IDSP22304 550 aa8.78□□□□□ -1
COPB1-211ENST00000534234 RPL10P27635 214 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 CHRNA4P43681 627 aa8.78□□□□□ -1
COPB1-211ENST00000534234 MARCKSL1P49006 195 aa8.78□□□□□ -1
COPB1-211ENST00000534234 UBE2IP63279 158 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 MC2RQ01718 297 aa8.78□□□□□ -1
COPB1-211ENST00000534234 SEPT7Q16181 437 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
COPB1-211ENST00000534234 KHDC1Q4VXA5 237 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 ZDHHC20Q5W0Z9 365 aa8.78□□□□□ -1
COPB1-211ENST00000534234 ABRAXAS1Q6UWZ7 409 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TMEM26Q6ZUK4 368 aa8.78□□□□□ -1
COPB1-211ENST00000534234 DAAM2Q86T65 1068 aa8.78□□□□□ -1
COPB1-211ENST00000534234 PLXDC1Q8IUK5 500 aa8.78□□□□□ -1
COPB1-211ENST00000534234 ZNF547Q8IVP9 402 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TRIM48Q8IWZ4 208 aa8.78□□□□□ -1
COPB1-211ENST00000534234 CACNA2D3Q8IZS8 1091 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TTC30BQ8N4P2 665 aa8.78□□□□□ -1
COPB1-211ENST00000534234 IPMKQ8NFU5 416 aa8.78□□□□□ -1
COPB1-211ENST00000534234 BRSK1Q8TDC3 778 aa8.78□□□□□ -1
COPB1-211ENST00000534234 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
COPB1-211ENST00000534234 RBM41Q96IZ5 413 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 MRGPRX2Q96LB1 330 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TEFMQ96QE5 360 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 VPS35Q96QK1 796 aa8.78□□□□□ -1
COPB1-211ENST00000534234 CTRCQ99895 268 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TIMM29Q9BSF4 260 aa8.78□□□□□ -1
COPB1-211ENST00000534234 SPRY4Q9C004 299 aa8.78□□□□□ -1
COPB1-211ENST00000534234 UCK1Q9HA47 277 aa8.78□□□□□ -1
COPB1-211ENST00000534234 LUC7LQ9NQ29 371 aaKnown RBP8.78□□□□□ -1
COPB1-211ENST00000534234 FBXO8Q9NRD0 319 aa8.78□□□□□ -1
COPB1-211ENST00000534234 HACD3Q9P035 362 aa8.78□□□□□ -1
COPB1-211ENST00000534234 IL17CQ9P0M4 197 aa8.78□□□□□ -1
COPB1-211ENST00000534234 PILRAQ9UKJ1 303 aa8.78□□□□□ -1
COPB1-211ENST00000534234 TRHDEQ9UKU6 1024 aa8.78□□□□□ -1
COPB1-211ENST00000534234 SLC30A1Q9Y6M5 507 aa8.78□□□□□ -1
COPB1-211ENST00000534234 LILRA5A6NI73 299 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 PRR19A6NJB7 356 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 HACD1B0YJ81 288 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 J3QKU1 62 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 BUD23O43709 281 aaKnown RBP8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A9O60656 530 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 RAD1O60671 282 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UBXN7O94888 489 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 BRAFP15056 766 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 TYRP1P17643 537 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 VCLP18206 1134 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A6P19224 532 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 HLA-DPA1P20036 260 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A1P22309 533 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A4P22310 534 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 CYLC1P35663 651 aaPredicted RBP8.77□□□□□ -1.01
COPB1-211ENST00000534234 DRG2P55039 364 aaKnown RBP8.77□□□□□ -1.01
COPB1-211ENST00000534234 MPP3Q13368 585 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 GTF2H3Q13889 308 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 SLC1A5Q15758 541 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 CHRNA6Q15825 494 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 TBR1Q16650 682 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 CCDC181Q5TID7 509 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 C11orf63Q6NUN7 778 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 CEACAM20Q6UY09 585 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 WASH2PQ6VEQ5 465 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 BBS12Q6ZW61 710 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 TRAPPC5Q8IUR0 188 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 DTX3LQ8TDB6 740 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 BLOC1S5Q8TDH9 187 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 KRT35Q92764 455 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 RTP4Q96DX8 246 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 ZPBPQ9BS86 351 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 SLC12A9Q9BXP2 914 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 C10orf88Q9H8K7 445 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A7Q9HAW7 530 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A10Q9HAW8 530 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 UGT1A8Q9HAW9 530 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 APMAPQ9HDC9 416 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 WASH6PQ9NQA3 447 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.77□□□□□ -1.011e-7■■■■■ 36.6
COPB1-211ENST00000534234 TRIM10Q9UDY6 481 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 PKP3Q9Y446 797 aa8.77□□□□□ -1.01
COPB1-211ENST00000534234 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
COPB1-211ENST00000534234 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1.01
COPB1-211ENST00000534234 KIF26BQ2KJY2 2108 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 CFAP46Q8IYW2 2715 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 GLYATL1P3A0A0U1RQE8 302 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 OR52A4PA6NMU1 304 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 H7C0C1 242 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms