RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CFAP20Q9Y6A4 193 aaKnown RBP9.5□□□□□ -0.89
SSBP3-215ENST00000533946 COL12A1Q99715 3063 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 OR2AG2A6NM03 316 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 ZIC2O95409 532 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 CPNE6O95741 557 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF7P17097 686 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 TYRP1P17643 537 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 RBMS1P29558 406 aaKnown RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 PBLDP30039 288 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 PTPN7P35236 360 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 LIMK2P53671 638 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 RWDD2BP57060 319 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 DCDC1P59894 354 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 ERVPABLB-1P60509 514 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 UBE2IP63279 158 aaKnown RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 XIAPP98170 497 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 TMEM115Q12893 351 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 PEX6Q13608 980 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 LY6DQ14210 128 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 SIX1Q15475 284 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 MAP9Q49MG5 647 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF569Q5MCW4 686 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 GPRC6AQ5T6X5 926 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 NDUFAF2Q8N183 169 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF248Q8NDW4 579 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 OR4K2Q8NGD2 314 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 CCHCR1Q8TD31 782 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 C1orf54Q8WWF1 131 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 SGF29Q96ES7 293 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 RBM41Q96IZ5 413 aaKnown RBP9.49□□□□□ -0.89
SSBP3-215ENST00000533946 PPM1MQ96MI6 270 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 TMEM121Q9BTD3 319 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 CDH19Q9H159 772 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 CARD9Q9H257 536 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 KCNK4Q9NYG8 393 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 VPS18Q9P253 973 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 CPNE7Q9UBL6 633 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 B3GALT1Q9Y5Z6 326 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 SPTBP11277 2137 aa9.49□□□□□ -0.89
SSBP3-215ENST00000533946 RGSL1A5PLK6 1076 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 OR51F1A6NGY5 319 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 RRP8O43159 456 aaKnown RBP9.48□□□□□ -0.89
SSBP3-215ENST00000533946 LDB2O43679 373 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 CDK14O94921 469 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 ITGA2BP08514 1039 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 ZSCAN5DPP0CG00 497 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 THRAP10827 490 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 PNLIPP16233 465 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 CA4P22748 312 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 CDC25BP30305 580 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 HMGCLP35914 325 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 FASLGP48023 281 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 SH3BP2P78314 561 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 HHEXQ03014 270 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 XRCC4Q13426 336 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 SNX1Q13596 522 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 NFE2L1Q14494 772 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 SLC14A2Q15849 920 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 CCDC38Q502W7 563 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 CCDC181Q5TID7 509 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 KCTD11Q693B1 232 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 FBXO38Q6PIJ6 1188 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 TMEM220Q6QAJ8 160 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 IGF2-ASQ6U949 168 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 NAPRTQ6XQN6 538 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 LRRC69Q6ZNQ3 347 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 PEX26Q7Z412 305 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 GLT6D1Q7Z4J2 308 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 PIM3Q86V86 326 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 BMPERQ8N8U9 685 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 SLC35B2Q8TB61 432 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 NCSTNQ92542 709 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 RSC1A1Q92681 617 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 ART4Q93070 314 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 HES6Q96HZ4 224 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 SPATA13Q96N96 652 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 ZSCAN5AQ9BUG6 496 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 THSD1Q9NS62 852 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 NFKBIL1Q9UBC1 381 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-215ENST00000533946 AMFRQ9UKV5 643 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
SSBP3-215ENST00000533946 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 CCDC66A2RUB6 948 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 EPOP01588 193 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 F7P08709 466 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 JMJD7P0C870 316 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 F3P13726 295 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF28P17035 718 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ARCN1P48444 511 aaKnown RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 ZNF140P52738 457 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 COPS2P61201 443 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 CCZ1BP86790 482 aa9.47□□□□□ -0.89
SSBP3-215ENST00000533946 CCZ1P86791 482 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-215ENST00000533946 MPP3Q13368 585 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms