RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAB23Q9ULC3 237 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 SLC9A8Q9Y2E8 581 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FAM149AA5PLN7 773 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 EFCAB10A6NFE3 127 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 RGS20O76081 388 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 TRIQKQ629K1 86 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF544Q6NX49 715 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 FAM124AQ86V42 546 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF317Q96PQ6 595 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 HDHD2Q9H0R4 259 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 XYLT2Q9H1B5 865 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SERHL2Q9H4I8 314 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SERHLQ9NQF3 203 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 TTC24A2A3L6 582 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 PIPSLA2A3N6 862 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SERPINB7O75635 380 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 WASP42768 502 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SSR2P43308 183 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 GSTM5P46439 218 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 COPZ1P61923 177 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 KCTD21Q4G0X4 260 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 DEPDC4Q8N2C3 294 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 PEBP4Q96S96 227 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 OSBPL10Q9BXB5 764 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 GPR88Q9GZN0 384 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 CLN6Q9NWW5 311 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 LRP6O75581 1613 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 NDUFB5O43674 189 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SNAI1O95863 264 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 IFNA16P05015 189 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SMIM11AP58511 58 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SLC5A9Q2M3M2 681 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SAMD4AQ9UPU9 718 aaKnown RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 AK5Q9Y6K8 562 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 C8AP07357 584 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 MLLT6P55198 1093 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SKA1Q96BD8 255 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 SMOQ99835 787 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 WRAP53Q9BUR4 548 aaKnown RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 TDRD1Q9BXT4 1180 aaKnown RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 POLR3BQ9NW08 1133 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-205ENST00000533464 FBXL21Q9UKT6 434 aa17.41■□□□□ 0.38
PHRF1-205ENST00000533464 GSAPA4D1B5 854 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 TRIM43BA6NCK2 446 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ENPP3O14638 875 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ZW10O43264 779 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 FGBP02675 491 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 SPACA7Q96KW9 195 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ALG2Q9H553 416 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 POMPQ9Y244 141 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 COMMD3-BMI1R4GMX3 469 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 FAM47E-STBD1D6RA91 191 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 DNTTP04053 509 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 SEMG2Q02383 582 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ELP6Q0PNE2 266 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ITGADQ13349 1161 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 SLC9B1Q4ZJI4 515 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ZBTB46Q86UZ6 589 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 DEPDC7Q96QD5 511 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CCSER2Q9H7U1 834 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 INTS10Q9NVR2 710 aaKnown RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 EPHX1P07099 455 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CDH5P33151 784 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CHIT1Q13231 466 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ZNHIT3Q15649 155 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 TMEM198Q66K66 360 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 MSANTD2Q6P1R3 559 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 OR10G6Q8NH81 332 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ING5Q8WYH8 240 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 FIZ1Q96SL8 496 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 SOHLH2Q9NX45 425 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 RSL24D1Q9UHA3 163 aaKnown RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 URADA6NGE7 173 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ITM2AO43736 263 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 PRNPP04156 253 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 BUD31P41223 144 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-205ENST00000533464 NOVP48745 357 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 SLC18A1P54219 525 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 CYP4F3Q08477 520 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 PLEKHG4Q58EX7 1191 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 FAM20CQ8IXL6 584 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 MYDGFQ969H8 173 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 NPY6RQ99463 290 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 EPB41L1Q9H4G0 881 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 OXSMQ9NWU1 459 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 MFHAS1Q9Y4C4 1052 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 WASF2Q9Y6W5 498 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 TOPAZ1Q8N9V7 1692 aa17.4■□□□□ 0.38
PHRF1-205ENST00000533464 ELOVL7A1L3X0 281 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 AGRPO00253 132 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms