RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PDE1BQ01064 536 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 ACY1Q03154 408 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 TUBB3Q13509 450 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 LAMB3Q13751 1172 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 PRR30Q53SZ7 412 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-223ENST00000533079 HSP90AA4PQ58FG1 418 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 PPP6R3Q5H9R7 873 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-223ENST00000533079 FIGNQ5HY92 759 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 HENMT1Q5T8I9 393 aaKnown RBP12.24□□□□□ -0.45
CAPN1-223ENST00000533079 CACHD1Q5VU97 1274 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 IZUMO3Q5VZ72 239 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 IQCKQ8N0W5 287 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 UBXN4Q92575 508 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 ELMO2Q96JJ3 720 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 PANX2Q96RD6 677 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 ERGIC2Q96RQ1 377 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 LYSMD1Q96S90 227 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 POLR1EQ9GZS1 481 aaKnown RBP12.24□□□□□ -0.45
CAPN1-223ENST00000533079 SEMA5BQ9P283 1151 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 H3BRJ5 948 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 CPNE3O75131 537 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 RNF8O76064 485 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 TYRP1P17643 537 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 FECHP22830 423 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 CCL11P51671 97 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 MAXP61244 160 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 RPL26P61254 145 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 OGDHQ02218 1023 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 UBXN1Q04323 297 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 IL10RAQ13651 578 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 ALG1LQ6GMV1 187 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 RFLNAQ6ZTI6 216 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 KMT5CQ86Y97 462 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 CNGA4Q8IV77 575 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 MCOLN2Q8IZK6 566 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 TC2NQ8N9U0 490 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 SIDT2Q8NBJ9 832 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 SLC41A2Q96JW4 573 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 PEBP4Q96S96 227 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 PARVAQ9NVD7 372 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 TAB2Q9NYJ8 693 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 CWC15Q9P013 229 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 MAP10Q9P2G4 905 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 CNOT6Q9ULM6 557 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 PYCARDQ9ULZ3 195 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 RPL26L1Q9UNX3 145 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 SRPK3Q9UPE1 567 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 SLC30A1Q9Y6M5 507 aa12.23□□□□□ -0.45
CAPN1-223ENST00000533079 TNRC6AQ8NDV7 1962 aaKnown RBP12.23□□□□□ -0.45
CAPN1-223ENST00000533079 FADS2P1A8MWK0 482 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 HNRNPRO43390 633 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 TIAF1O95411 115 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 CBX6O95503 412 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 PDHA1P08559 390 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 TPM1P09493 284 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 POU3F2P20265 443 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 CES1P23141 567 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 ARL4AP40617 200 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 PTGIRP43119 386 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 RRADP55042 308 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 CHAF1BQ13112 559 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 ELOAQ14241 798 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 NAA30Q147X3 362 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 PTPRRQ15256 657 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 NR6A1Q15406 480 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 INSCQ1MX18 579 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 PWWP2BQ6NUJ5 590 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 ZNF517Q6ZMY9 492 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 CYP4V2Q6ZWL3 525 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 MED25Q71SY5 747 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 LRRC49Q8IUZ0 686 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 TEX26Q8N6G2 289 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 TMEM102Q8N9M5 508 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 OR8K5Q8NH50 307 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 ADAMTS17Q8TE56 1095 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 RSC1A1Q92681 617 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 ZNF514Q96K75 400 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 CD180Q99467 661 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 SMAD5Q99717 465 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 TDRD1Q9BXT4 1180 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 WASH6PQ9NQA3 447 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 GPR83Q9NYM4 423 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 C5AR2Q9P296 337 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 AMACRQ9UHK6 382 aa12.22□□□□□ -0.45
CAPN1-223ENST00000533079 FARSAQ9Y285 508 aaKnown RBP12.22□□□□□ -0.45
CAPN1-223ENST00000533079 A0A0U1RQS6 177 aa12.21□□□□□ -0.45
CAPN1-223ENST00000533079 CHUKO15111 745 aa12.21□□□□□ -0.45
CAPN1-223ENST00000533079 VEGFDO43915 354 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms