RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SMOXQ9NWM0 555 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 TBC1D29Q9UFV1 150 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ATXN7L1Q9ULK2 861 aaPredicted RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 KNTC1P50748 2209 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 LAMA5O15230 3695 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 KIR2DS5A0A0G2JLQ3 304 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 A0A0G2JNG1 304 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 A6NCN8 305 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 KIR2DS3K7RE56 304 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 PPM1DO15297 605 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 STX7O15400 261 aaKnown RBP16.43■□□□□ 0.22
PKP3-209ENST00000533069 B4GAT1O43505 415 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 CDK14O94921 469 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 CRTAMO95727 393 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 FGGP02679 453 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 F3P13726 295 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 GPLD1P80108 840 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 SQSTM1Q13501 440 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 KIR2DS5Q14953 304 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 PARP6Q2NL67 630 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 COL28A1Q2UY09 1125 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 AMZ1Q400G9 498 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 LDLRAP1Q5SW96 308 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 ZNF648Q5T619 568 aaPredicted RBP16.43■□□□□ 0.22
PKP3-209ENST00000533069 IYDQ6PHW0 289 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 FOXR1Q6PIV2 292 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 CRTC3Q6UUV7 619 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 RAB11FIP2Q7L804 512 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 CLEC14AQ86T13 490 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 SLITRK4Q8IW52 837 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 FBXO39Q8N4B4 442 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 FAM71DQ8N9W8 422 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 GDAP1Q8TB36 358 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 COG1Q8WTW3 980 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 SH3KBP1Q96B97 665 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 RUNDC3BQ96NL0 473 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 C19orf43Q9BQ61 176 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 TBL1YQ9BQ87 522 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
PKP3-209ENST00000533069 KLC4Q9NSK0 619 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 KCNK4Q9NYG8 393 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 TMPRSS11EQ9UL52 423 aa16.43■□□□□ 0.22
PKP3-209ENST00000533069 ACACAQ13085 2346 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 CDRT15L2A8MXV6 281 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 TNFSF15O95150 251 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 EML2O95834 649 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 VCLP18206 1134 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 LPOP22079 712 aaPredicted RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 CD1CP29017 333 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 HHEXQ03014 270 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 TMEM115Q12893 351 aaPredicted RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 CHRNA6Q15825 494 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 INSCQ1MX18 579 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 FAM151BQ6UXP7 276 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 SLC9B2Q86UD5 537 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 DDHD1Q8NEL9 900 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 CCDC97Q96F63 343 aaPredicted RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 SLC38A3Q99624 504 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 CMKLR1Q99788 373 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 APOL2Q9BQE5 337 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 ARNT2Q9HBZ2 717 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 AKAP7Q9P0M2 348 aaPredicted RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 R3HDM2Q9Y2K5 976 aaKnown RBP16.42■□□□□ 0.22
PKP3-209ENST00000533069 LOXL2Q9Y4K0 774 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 ARL5AQ9Y689 179 aa16.42■□□□□ 0.22
PKP3-209ENST00000533069 MYLKQ15746 1914 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 CTAGE15A4D2H0 777 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 BUD23O43709 281 aaKnown RBP16.41■□□□□ 0.22
PKP3-209ENST00000533069 SNX2O60749 519 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 KCNJ13O60928 360 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 MTX2O75431 263 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 PRAMEF1O95521 474 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 JMJD7P0C870 316 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 CTAGE8P0CG41 777 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 ZNF7P17097 686 aaPredicted RBP16.41■□□□□ 0.22
PKP3-209ENST00000533069 UGT1A5P35504 534 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 KHDC1Q4VXA5 237 aaKnown RBP16.41■□□□□ 0.22
PKP3-209ENST00000533069 PHF19Q5T6S3 580 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 CTAGE6Q86UF2 777 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 ZNF547Q8IVP9 402 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 CTAGE4Q8IX94 777 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 OR4D9Q8NGE8 314 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 OR10G6Q8NH81 332 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 NUDT22Q9BRQ3 303 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 TMEM121Q9BTD3 319 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.41■□□□□ 0.22
PKP3-209ENST00000533069 DPH1Q9BZG8 443 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 OSGEPL1Q9H4B0 414 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 LRRC40Q9H9A6 602 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 RDH14Q9HBH5 336 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 PCDHGA7Q9Y5G6 932 aa16.41■□□□□ 0.22
PKP3-209ENST00000533069 TRBV23OR9-2A0A075B6M9 112 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 TCRBV7S2A1N4TA0A589 114 aa16.4■□□□□ 0.22
PKP3-209ENST00000533069 PMS2P1A4D2B8 440 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms