RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 XIAPP98170 497 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 LONRF2Q1L5Z9 754 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 C3orf38Q5JPI3 329 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 GPRC6AQ5T6X5 926 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 IYDQ6PHW0 289 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 B3GNT8Q7Z7M8 397 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 LINC00523Q86TU6 105 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 TRAPPC5Q8IUR0 188 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 GLIS1Q8NBF1 620 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 FOXP3Q9BZS1 431 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 ASB8Q9H765 288 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 PIH1D1Q9NWS0 290 aaKnown RBP15.15■□□□□ 0.02
CPSF1-210ENST00000532935 PAK5Q9P286 719 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 SATB2Q9UPW6 733 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 DRG1Q9Y295 367 aaKnown RBP15.15■□□□□ 0.02
CPSF1-210ENST00000532935 RAXQ9Y2V3 346 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 NBEAQ8NFP9 2946 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 A0A1W2PNU3 283 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-210ENST00000532935 PRR19A6NJB7 356 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 OR5K4A6NMS3 321 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 TMX2-CTNND1H3BSU7 103 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 ZSCAN5DPP0CG00 497 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 F3P13726 295 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 SLC2A4P14672 509 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 LMAN1P49257 510 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 INHBCP55103 352 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 NFATC2Q13469 925 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 POU6F1Q14863 301 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 AMZ1Q400G9 498 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-210ENST00000532935 C11orf96Q7Z7L8 435 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 RASGEF1AQ8N9B8 481 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 LIN37Q96GY3 246 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-210ENST00000532935 DNAJC1Q96KC8 554 aaKnown RBP15.14■□□□□ 0.01
CPSF1-210ENST00000532935 TMEM74Q96NL1 305 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 EPB41L5Q9HCM4 733 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 PRDM8Q9NQV8 689 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 RAB6BQ9NRW1 208 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 DNAJC16Q9Y2G8 782 aa15.14■□□□□ 0.01
CPSF1-210ENST00000532935 ADAMTS20P59510 1910 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CCDC187A0A096LP49 1063 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 KIR2DS5A0A0G2JLQ3 304 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 A0A0G2JNG1 304 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 E7EVH7 732 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 KIR2DS3K7RE56 304 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CCL22O00626 93 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 TLX3O43711 291 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 DXOO77932 396 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SUN1O94901 812 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CPNE6O95741 557 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 MSH3P20585 1137 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CD1CP29017 333 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 AKT1P31749 480 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CCKBRP32239 447 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 RPL22P35268 128 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CTSCP53634 463 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 HHEXQ03014 270 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 ZFP36L1Q07352 338 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 CDH17Q12864 832 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SEMA5AQ13591 1074 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SEPT6Q14141 434 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 KIR2DS5Q14953 304 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 TBC1D25Q3MII6 688 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 MAP9Q49MG5 647 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 TMEM220Q6QAJ8 160 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 TMPRSS9Q7Z410 1059 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SLC9B2Q86UD5 537 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 LSMEM2Q8N112 164 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SLC35F6Q8N357 371 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 DNAAF3Q8N9W5 541 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 OR52K1Q8NGK4 314 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 WDR36Q8NI36 951 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 ULK4Q96C45 1275 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 PBKQ96KB5 322 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 STRADBQ9C0K7 418 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 STN1Q9H668 368 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 RDH14Q9HBH5 336 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 SARS2Q9NP81 518 aaKnown RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 NLE1Q9NVX2 485 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-210ENST00000532935 KCNK4Q9NYG8 393 aa15.13■□□□□ 0.01
CPSF1-210ENST00000532935 IGHV1OR21-1A0A087WYE8 117 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PMS2P1A4D2B8 440 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 OR2AG2A6NM03 316 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 AGAP14A8MT82 685 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 H7C0S8 307 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 KRT37O76014 449 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 VCLP18206 1134 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 ITGALP20701 1170 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 MC4RP32245 332 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 KCNJ1P48048 391 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 SEPT7Q16181 437 aaKnown RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 CLPPQ16740 277 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 NKAIN2Q5VXU1 208 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PPP1R21Q6ZMI0 780 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 USP53Q70EK8 1073 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 GSTA5Q7RTV2 222 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms