RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 AMZ1Q400G9 498 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 LINC00523Q86TU6 105 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 TRAPPC5Q8IUR0 188 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 SNIP1Q8TAD8 396 aaKnown RBP22.65■■□□□ 1.22
CAPN1-222ENST00000532285 OSGEPL1Q9H4B0 414 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 STN1Q9H668 368 aaKnown RBP22.65■■□□□ 1.22
CAPN1-222ENST00000532285 EPB41L5Q9HCM4 733 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 SARS2Q9NP81 518 aaKnown RBP22.65■■□□□ 1.22
CAPN1-222ENST00000532285 LAMA5O15230 3695 aa22.65■■□□□ 1.22
CAPN1-222ENST00000532285 A0A087WV48 116 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 GPR39O43194 453 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SRP72O76094 671 aaKnown RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 IFNB1P01574 187 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 CD1CP29017 333 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 RBMS1P29558 406 aaKnown RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 FDFT1P37268 417 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 ZNF140P52738 457 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 HHEXQ03014 270 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SQSTM1Q13501 440 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SIX1Q15475 284 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 PLA2G4EQ3MJ16 856 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 MAP9Q49MG5 647 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 GPRC6AQ5T6X5 926 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 DRICH1Q6PGQ1 229 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SLC9B2Q86UD5 537 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 TAB3Q8N5C8 712 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-222ENST00000532285 AVL9Q8NBF6 648 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 OR13C4Q8NGS5 318 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SH3KBP1Q96B97 665 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 SLC46A1Q96NT5 459 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 ASB8Q9H765 288 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 PRDM8Q9NQV8 689 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 KCNK4Q9NYG8 393 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 FKBPLQ9UIM3 349 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 CFAP47Q6ZTR5 3102 aa22.64■■□□□ 1.21
CAPN1-222ENST00000532285 IGHV1OR21-1A0A087WYE8 117 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 LDB2O43679 373 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 KCNJ13O60928 360 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 FGGP02679 453 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 VCLP18206 1134 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 CA5AP35218 305 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 EIF2S3P41091 472 aaKnown RBP22.63■■□□□ 1.21
CAPN1-222ENST00000532285 MLLT3P42568 568 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-222ENST00000532285 GPLD1P80108 840 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 XIAPP98170 497 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 NFATC2Q13469 925 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 FOXR1Q6PIV2 292 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 USP53Q70EK8 1073 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 RAB11FIP2Q7L804 512 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 SLITRK4Q8IW52 837 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 CCDC89Q8N998 374 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 RASGEF1AQ8N9B8 481 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 PRR11Q96HE9 360 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-222ENST00000532285 DCBLD2Q96PD2 775 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 SLC38A3Q99624 504 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 RDH14Q9HBH5 336 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 ETNK1Q9HBU6 452 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 ASCL3Q9NQ33 180 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 THSD1Q9NS62 852 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 DRG1Q9Y295 367 aaKnown RBP22.63■■□□□ 1.21
CAPN1-222ENST00000532285 DNAJC16Q9Y2G8 782 aa22.63■■□□□ 1.21
CAPN1-222ENST00000532285 DNMT3AQ9Y6K1 912 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-222ENST00000532285 PRR19A6NJB7 356 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 PLD2O14939 933 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 RRP8O43159 456 aaKnown RBP22.62■■□□□ 1.21
CAPN1-222ENST00000532285 CEP104O60308 925 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 TPH1P17752 444 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 MSH3P20585 1137 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 AKT1P31749 480 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 TMPRSS9Q7Z410 1059 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 C11orf96Q7Z7L8 435 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 FBXO39Q8N4B4 442 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 TMEM159Q96B96 161 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 ZNF514Q96K75 400 aaPredicted RBP22.62■■□□□ 1.21
CAPN1-222ENST00000532285 DPYSL5Q9BPU6 564 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 CPNE7Q9UBL6 633 aa22.62■■□□□ 1.21
CAPN1-222ENST00000532285 AGAP14A8MT82 685 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 XRCC1P18887 633 aaPredicted RBP22.61■■□□□ 1.21
CAPN1-222ENST00000532285 IDSP22304 550 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 CXCR5P32302 372 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 LMAN1P49257 510 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 TMPRSS15P98073 1019 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 TMEM220Q6QAJ8 160 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 WASH2PQ6VEQ5 465 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 LRRC69Q6ZNQ3 347 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 AMZ2Q86W34 360 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 ULK4Q96C45 1275 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 AHCYL2Q96HN2 611 aaKnown RBP22.61■■□□□ 1.21
CAPN1-222ENST00000532285 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.61■■□□□ 1.21
CAPN1-222ENST00000532285 SEMA6CQ9H3T2 930 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 WASH6PQ9NQA3 447 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 HOMER3Q9NSC5 361 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 NLE1Q9NVX2 485 aaPredicted RBP22.61■■□□□ 1.21
CAPN1-222ENST00000532285 PAK5Q9P286 719 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 JRKLQ9Y4A0 524 aa22.61■■□□□ 1.21
CAPN1-222ENST00000532285 ZFHX4Q86UP3 3567 aa22.6■■□□□ 1.21
CAPN1-222ENST00000532285 PDZK1P1A8MUH7 402 aa22.6■■□□□ 1.21
CAPN1-222ENST00000532285 E7EVH7 732 aa22.6■■□□□ 1.21
CAPN1-222ENST00000532285 SUN1O94901 812 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms