RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 AGXTP21549 392 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CD9P21926 228 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 MIPP30301 263 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 HTR7P34969 479 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ABCG1P45844 678 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 IRF9Q00978 393 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 PIGFQ07326 219 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CDK5R2Q13319 367 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 UGCGQ16739 394 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CA9Q16790 459 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ZC3HC1Q86WB0 502 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RASGRP3Q8IV61 690 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 PAF1Q8N7H5 531 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 JOSD2Q8TAC2 188 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 FCGR1BQ92637 280 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SLC38A4Q969I6 547 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM125Q96AQ2 219 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ACOT13Q9NPJ3 140 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF277Q9NRM2 450 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SLC39A1Q9NY26 324 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ELF5Q9UKW6 265 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 USP18Q9UMW8 372 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ERVW-1Q9UQF0 538 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TPRKBQ9Y3C4 175 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 DOCK1Q14185 1865 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SBF1O95248 1867 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 YKT6O15498 198 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 FGF18O76093 207 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 MATN4O95460 622 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TCF3P15923 654 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 HTR1EP28566 365 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ALDH4A1P30038 563 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 PIK3CBP42338 1070 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CCR10P46092 362 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 MASP1P48740 699 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 NAGLUP54802 743 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 GALEQ14376 348 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ZIK1Q3SY52 487 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 PYCR3Q53H96 274 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TOR1AIP1Q5JTV8 583 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 KDM4DQ6B0I6 523 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 LHX5Q9H2C1 402 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RLFQ13129 1914 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ZSWIM8A7E2V4 1837 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SSC5DA1L4H1 1573 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ATP6AP2A0A1C7CYW4 349 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM150BA6NC51 233 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SLC16A4O15374 487 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 WDPCPO95876 746 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 HDCP19113 662 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 NPY2RP49146 381 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CPT1AP50416 773 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CDH13P55290 713 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 AP1S2P56377 157 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 POLR2GP62487 172 aaKnown RBP eCLIP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 YBX1P67809 324 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RAB6CQ53S08 254 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 HABP4Q5JVS0 413 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 LAMTOR1Q6IAA8 161 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TIGD7Q6NT04 549 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 BRAT1Q6PJG6 821 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.122e-7■■■□□ 15.4
CSDE1-214ENST00000530886 ADGRG3Q86Y34 549 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SYTL1Q8IYJ3 562 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 ANKRD49Q8WVL7 239 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TMBIM1Q969X1 311 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 TESCQ96BS2 214 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 FYTTD1Q96QD9 318 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RBM4BQ9BQ04 359 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 USB1Q9BQ65 265 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 MXRA8Q9BRK3 442 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RBM4Q9BWF3 364 aaKnown RBP8.06□□□□□ -1.12
CSDE1-214ENST00000530886 RAB6CQ9H0N0 254 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SLC52A3Q9NQ40 469 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 BFARQ9NZS9 450 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 SNX6Q9UNH7 406 aa8.06□□□□□ -1.12
CSDE1-214ENST00000530886 GBF1Q92538 1859 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 A0A075B6Q4 140 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 LOC100130705A0A1B0GUX0 176 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 APOL1O14791 398 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 INPP4BO15327 924 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 CHMP2AO43633 222 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 FZD6O60353 706 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 SLC22A5O76082 557 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 POLBP06746 335 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 RPS17P08708 135 aaKnown RBP8.05□□□□□ -1.12
CSDE1-214ENST00000530886 LSM3P62310 102 aaKnown RBP8.05□□□□□ -1.12
CSDE1-214ENST00000530886 SLAMF1Q13291 335 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 RFX4Q33E94 735 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 PITRM1Q5JRX3 1037 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 PM20D1Q6GTS8 502 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 KBTBD8Q8NFY9 601 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 OR8K5Q8NH50 307 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 SMG7Q92540 1137 aaKnown RBP8.05□□□□□ -1.12
CSDE1-214ENST00000530886 REPS1Q96D71 796 aa8.05□□□□□ -1.12
CSDE1-214ENST00000530886 RIT2Q99578 217 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms