RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 ZNF682O95780 498 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 CNPP09543 421 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 ATP5C1P36542 298 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 NR4A2P43354 598 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 SULT2A1Q06520 285 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 FRG1Q14331 258 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 UBE2UQ5VVX9 321 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 PAQR3Q6TCH7 311 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 FKBP9P1Q75LS8 142 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 ANKRD49Q8WVL7 239 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 IGSF8Q969P0 613 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 CREBZFQ9NS37 354 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 TAS2R13Q9NYV9 303 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 RCOR3Q9P2K3 495 aaPredicted RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 KLQ9UEF7 1012 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 ANKRD6Q9Y2G4 727 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 AZIN1O14977 448 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 FASP25445 335 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 GKP32189 559 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 SF3B4Q15427 424 aaKnown RBP eCLIP12.59□□□□□ -0.392e-8■■■■■ 31.1
LTBP3-218ENST00000530866 RABL3Q5HYI8 236 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 TCAIMQ8N3R3 496 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 CENPIQ92674 756 aaPredicted RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 SNX5Q9Y5X3 404 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 MATN3O15232 486 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 B4GALT3O60512 393 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 H2AFYO75367 372 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 PABPC1P11940 636 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 AGTR2P50052 363 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 SMAD3P84022 425 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 CD300CQ08708 224 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 PAFAH1B3Q15102 231 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 SAMD4BQ5PRF9 694 aaKnown RBP12.59□□□□□ -0.39
LTBP3-218ENST00000530866 FUT10Q6P4F1 479 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 OSER1Q9NX31 292 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 LOXHD1Q8IVV2 1947 aa12.59□□□□□ -0.39
LTBP3-218ENST00000530866 CCDC154A6NI56 674 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 SNAP91O60641 907 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 ADSLP30566 484 aaPredicted RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 SLC5A2P31639 672 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 DIO3P55073 304 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 NAB1Q13506 487 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 CPSF6Q16630 551 aaKnown RBP eCLIP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 TAZQ16635 292 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 ERI1Q8IV48 349 aaKnown RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 CPNE9Q8IYJ1 553 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 KCTD13Q8WZ19 329 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 RERGLQ9H628 205 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 RUBCNLQ9H714 662 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 TBCCD1Q9NVR7 557 aa12.58□□□□□ -0.39
LTBP3-218ENST00000530866 ZFP37Q9Y6Q3 630 aaPredicted RBP12.58□□□□□ -0.39
LTBP3-218ENST00000530866 CDC7O00311 574 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GJB5O95377 273 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 ZNF12P17014 697 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 PBLDP30039 288 aaPredicted RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 DGCR6Q14129 220 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 BOP1Q14137 746 aaKnown RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 TCEA2Q15560 299 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 CCDC85BQ15834 202 aaPredicted RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 KCNJ8Q15842 424 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 ZNF697Q5TEC3 545 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 PIK3R6Q5UE93 754 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 OTUD1Q5VV17 481 aaPredicted RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 PDSS2Q86YH6 399 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 SLC44A2Q8IWA5 706 aaPredicted RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 PGAM4Q8N0Y7 254 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 RTL3Q8N8U3 475 aaKnown RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GOLM1Q8NBJ4 401 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 LINGO1Q96FE5 620 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GPR22Q99680 433 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 CXorf21Q9HAI6 301 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 EXD2Q9NVH0 621 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 RAD54BQ9Y620 910 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 CROCCQ5TZA2 2017 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 PDZK1P1A8MUH7 402 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GABRDO14764 452 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GUCY1B2O75343 617 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 CCNKO75909 580 aa12.58□□□□□ -0.4
LTBP3-218ENST00000530866 RPLP2P05387 115 aaKnown RBP12.58□□□□□ -0.4
LTBP3-218ENST00000530866 GABRB3P28472 473 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms