RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 NME8Q8N427 588 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF713Q8N859 430 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 CEP76Q8TAP6 659 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 WDR26Q9H7D7 661 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 CATSPERBQ9H7T0 1116 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 RIC8AQ9NPQ8 531 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 MYO6Q9UM54 1294 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 GINS2Q9Y248 185 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 KDM3AQ9Y4C1 1321 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 NLRC5Q86WI3 1866 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 DOCK5Q9H7D0 1870 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 SAC3D1A6NKF1 404 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 STX16-NPEPL1H3BU86 382 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 DDX39AO00148 427 aaKnown RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 HSPB6O14558 160 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 STX16O14662 325 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 ZBTB43O43298 467 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 CCNE2O96020 404 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 DNAJB1P25685 340 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 BYSLQ13895 437 aaKnown RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 TMEM266Q2M3C6 531 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 FNBP1LQ5T0N5 605 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 OTUD1Q5VV17 481 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 HEPHL1Q6MZM0 1159 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 FAM43BQ6ZT52 329 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 NIPA1Q7RTP0 329 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF367Q7RTV3 350 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 ADGRD2Q7Z7M1 963 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 IQCF1Q8N6M8 205 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 SPPL3Q8TCT6 385 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 ATP8B4Q8TF62 1192 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 NEUROG1Q92886 237 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 APOLD1Q96LR9 279 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 NEK1Q96PY6 1258 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 TEFMQ96QE5 360 aaKnown RBP7.18□□□□□ -1.26
CSDE1-213ENST00000530784 CTDSP1Q9GZU7 261 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 GLT8D2Q9H1C3 349 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 BARHL2Q9NY43 387 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 MUTYHQ9UIF7 546 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 DHDHQ9UQ10 334 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 DERAQ9Y315 318 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 LRP12Q9Y561 859 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 COL1A2P08123 1366 aa7.18□□□□□ -1.26
CSDE1-213ENST00000530784 IGKV6D-21A0A0A0MT36 114 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 KLF18A0A0U1RQI7 1052 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 DENND3A2RUS2 1198 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SMCO2A6NFE2 343 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 TPD52L2O43399 206 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SLC28A2O43868 658 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 HBP1O60381 514 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 RPS6KA5O75582 802 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SKIV2L2P42285 1042 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 MTNR1AP48039 350 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 NRIP1P48552 1158 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 ABATP80404 500 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 ZXDBP98169 803 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 UBE3AQ05086 875 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 IL13RA2Q14627 380 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF585BQ52M93 769 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 HERC4Q5GLZ8 1057 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 DNTTIP2Q5QJE6 756 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SPOUT1Q5T280 376 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 RBM23Q86U06 439 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 PLA2G4DQ86XP0 818 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 CCDC60Q8IWA6 550 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 NKAPQ8N5F7 415 aaKnown RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SMRP1Q8NCR6 262 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 TCEANC2Q96MN5 208 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF302Q9NR11 478 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 SEL1LQ9UBV2 794 aa7.17□□□□□ -1.26
CSDE1-213ENST00000530784 BARX2Q9UMQ3 279 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-213ENST00000530784 MYO9BQ13459 2157 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 FAM86B1E9PN63 330 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 MS4A18H0YCH9 400 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 LIASO43766 372 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 CBX6O95503 412 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 C22orf31O95567 290 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 FAM86B2P0C5J1 330 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 MYZAPP0CAP1 466 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 TNFRSF8P28908 595 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 HOXD3P31249 432 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-213ENST00000530784 SETQ01105 290 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-213ENST00000530784 Q0VFX4 171 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 COASYQ13057 564 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 KRT32Q14532 448 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 KLHL22Q53GT1 634 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 INO80DQ53TQ3 878 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-213ENST00000530784 CBWD5Q5RIA9 395 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 SH2D4BQ5SQS7 431 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 JAKMIP3Q5VZ66 844 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 SLC24A5Q71RS6 500 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 SERPINA11Q86U17 422 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 ZDHHC23Q8IYP9 409 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 THNSL1Q8IYQ7 743 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms