RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PPM1JQ5JR12 505 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 RNF187Q5TA31 235 aaPredicted RBP10.53□□□□□ -0.72
SOX6-213ENST00000530378 HECTD2Q5U5R9 776 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 PTRHD1Q6GMV3 140 aaKnown RBP10.53□□□□□ -0.72
SOX6-213ENST00000530378 ADAMTSL4Q6UY14 1074 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 TAOK1Q7L7X3 1001 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 CEP97Q8IW35 865 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 LMNTD2Q8IXW0 634 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 DDHD1Q8NEL9 900 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 MZB1Q8WU39 189 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 SGSM3Q96HU1 749 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 BIRC8Q96P09 236 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 ROPN1BQ9BZX4 212 aaPredicted RBP10.53□□□□□ -0.72
SOX6-213ENST00000530378 CCDC68Q9H2F9 335 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 ACBD3Q9H3P7 528 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 ROPN1Q9HAT0 212 aaPredicted RBP10.53□□□□□ -0.72
SOX6-213ENST00000530378 TMBIM4Q9HC24 238 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 MRPL40Q9NQ50 206 aaKnown RBP10.53□□□□□ -0.72
SOX6-213ENST00000530378 PCMTD2Q9NV79 361 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 SMOXQ9NWM0 555 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 CACNA1HO95180 2353 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 LRP4O75096 1905 aa10.53□□□□□ -0.72
SOX6-213ENST00000530378 TNRC6BQ9UPQ9 1833 aaKnown RBP10.52□□□□□ -0.72
SOX6-213ENST00000530378 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 AGAP14A8MT82 685 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 PRMT5O14744 637 aaPredicted RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 ALDOAP04075 364 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 SNRPAP09012 282 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 PKMP14618 531 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 ZNF7P17097 686 aaPredicted RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 PI4KAP42356 2102 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 DHPSP49366 369 aaPredicted RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 SERPINB9P50453 376 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 CCR5P51681 352 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 IRF9Q00978 393 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 AGERQ15109 404 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 ANGPT1Q15389 498 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 LPAL2Q16609 132 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 CERS6Q6ZMG9 384 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 RAPH1Q70E73 1250 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 ADGRG6Q86SQ4 1221 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 TRAPPC5Q8IUR0 188 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 RGL4Q8IZJ4 473 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 SPATA6LQ8N4H0 392 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 RASGEF1AQ8N9B8 481 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 SIDT2Q8NBJ9 832 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 OR13H1Q8NG92 308 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 VPS35Q96QK1 796 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 TCF12Q99081 682 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 TTC1Q99614 292 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 GPR22Q99680 433 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 SLC30A3Q99726 388 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 C19orf43Q9BQ61 176 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 AARSD1Q9BTE6 412 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 SNX15Q9NRS6 342 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 ATXN10Q9UBB4 475 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 FETUBQ9UGM5 382 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 LGALS13Q9UHV8 139 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 ZNF180Q9UJW8 692 aa10.52□□□□□ -0.73
SOX6-213ENST00000530378 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
SOX6-213ENST00000530378 TMEM202A6NGA9 273 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 E5RI56 91 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 PFDN6O15212 129 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 SPAG7O75391 227 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 SYF2O95926 243 aaKnown RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 MT-ND3P03897 115 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 ZNF8P17098 575 aaPredicted RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 CHRM3P20309 590 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 HPDP32754 393 aaPredicted RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 PPARGP37231 505 aaPredicted RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 NSG1P42857 185 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 SLC12A2P55011 1212 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 TMEM115Q12893 351 aaPredicted RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 LDLRAP1Q5SW96 308 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 RD3Q7Z3Z2 195 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 WDR5BQ86VZ2 330 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 RAVER1Q8IY67 606 aaKnown RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 TMEM145Q8NBT3 493 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 PDXPQ96GD0 296 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 BMFQ96LC9 184 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 GPR21Q99679 349 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 SH3GL2Q99962 352 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 ORAI3Q9BRQ5 295 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 APOOQ9BUR5 198 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 P2RY12Q9H244 342 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 VPS11Q9H270 941 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 PHPT1Q9NRX4 125 aaPredicted RBP10.51□□□□□ -0.73
SOX6-213ENST00000530378 TM7SF3Q9NS93 570 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 GNPTGQ9UJJ9 305 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
SOX6-213ENST00000530378 TMEM131Q92545 1883 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms