RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 ACTN1P12814 892 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 HIST1H2ADP20671 130 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 KCNA5P22460 613 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 HOXA13P31271 388 aaPredicted RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 HOXD13P35453 343 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 PSMB10P40306 273 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 MSH2P43246 934 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 MC1RQ01726 317 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 CREB5Q02930 508 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 POU3F1Q03052 451 aaPredicted RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 MEA1Q16626 185 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 TMEM35AQ53FP2 167 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 OR7E24Q6IFN5 339 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 ZNF704Q6ZNC4 412 aaPredicted RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 Q75L30 129 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 HIST3H2AQ7L7L0 130 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 SZRD1Q7Z422 152 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 FAM9BQ8IZU0 186 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 CIARTQ8N365 385 aaPredicted RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 SLC38A9Q8NBW4 561 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 FAM120BQ96EK7 910 aaKnown RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 FEM1CQ96JP0 617 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 NEUROD6Q96NK8 337 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 GFI1Q99684 422 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 SDF4Q9BRK5 362 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 SYNCQ9H7C4 482 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 ABCF3Q9NUQ8 709 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 TBC1D29Q9UFV1 150 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 POU2F3Q9UKI9 436 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 ICAM5Q9UMF0 924 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 TMEM184BQ9Y519 407 aaPredicted RBP4.2□□□□□ -1.74
SOX6-212ENST00000529469 RPS6KL1Q9Y6S9 549 aa4.2□□□□□ -1.74
SOX6-212ENST00000529469 ZCWPW2A0A1B0GU75 182 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 EIF3DO15371 548 aaKnown RBP eCLIP4.19□□□□□ -1.74
SOX6-212ENST00000529469 GPC4O75487 556 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 GJB3O75712 270 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 KRT36O76013 467 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 HRH2P25021 359 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 IL15P40933 162 aaPredicted RBP4.19□□□□□ -1.74
SOX6-212ENST00000529469 AMPHP49418 695 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 PLIN5Q00G26 463 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 SYT16Q17RD7 645 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 DUSP28Q4G0W2 176 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 RAB6CQ53S08 254 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 RARS2Q5T160 578 aaKnown RBP4.19□□□□□ -1.74
SOX6-212ENST00000529469 ITPRIPL1Q6GPH6 555 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 FAM171BQ6P995 826 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 MUC20Q8N307 709 aaPredicted RBP4.19□□□□□ -1.74
SOX6-212ENST00000529469 EMC1Q8N766 993 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 MAB21L3Q8N8X9 362 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 OR52I2Q8NH67 350 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 DNAAF4Q8WXU2 420 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 NUDCD1Q96RS6 583 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 SEMA3CQ99985 751 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 RAB6CQ9H0N0 254 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 SMARCAD1Q9H4L7 1026 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 HAUS2Q9NVX0 235 aa4.19□□□□□ -1.74
SOX6-212ENST00000529469 ZNF215Q9UL58 517 aaPredicted RBP4.19□□□□□ -1.74
SOX6-212ENST00000529469 TMEM8BA6NDV4 472 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 C16orf97H3BN30 126 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 BMPR1BO00238 502 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 ZNF217O75362 1048 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 TUBBP07437 444 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 MARK3P27448 753 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 MVPQ14764 893 aaKnown RBP4.18□□□□□ -1.74
SOX6-212ENST00000529469 MZT2BQ6NZ67 158 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 CEP97Q8IW35 865 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 SCYL3Q8IZE3 742 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 GSDMBQ8TAX9 411 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 TMEM255BQ8WV15 326 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 LINGO1Q96FE5 620 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 NEURL2Q9BR09 285 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 POLR3CQ9BUI4 534 aaPredicted RBP4.18□□□□□ -1.74
SOX6-212ENST00000529469 TMEM39BQ9GZU3 492 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 LRMDAQ9H2I8 198 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 MARCH4Q9P2E8 410 aaPredicted RBP4.18□□□□□ -1.74
SOX6-212ENST00000529469 ADD3Q9UEY8 706 aaKnown RBP4.18□□□□□ -1.74
SOX6-212ENST00000529469 NRBP1Q9UHY1 535 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 TSPYL4Q9UJ04 414 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 VPS28Q9UK41 221 aa4.18□□□□□ -1.74
SOX6-212ENST00000529469 A0A087WYN8 130 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 A0A1W2PS18 150 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 ANKRD18BA2A2Z9 1011 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 CTAGE9A4FU28 777 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 C5orf60A6NFR6 353 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 CAPN9O14815 690 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 CTAGE8P0CG41 777 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 CETPP11597 493 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 SELLP14151 372 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 FMO5P49326 533 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 MFAP4P55083 255 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 NAP1L1P55209 391 aaKnown RBP4.17□□□□□ -1.74
SOX6-212ENST00000529469 PITX1P78337 314 aaPredicted RBP4.17□□□□□ -1.74
SOX6-212ENST00000529469 AIMP2Q13155 320 aaKnown RBP4.17□□□□□ -1.74
SOX6-212ENST00000529469 RAB41Q5JT25 222 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 SIRPB2Q5JXA9 342 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 KCTD8Q6ZWB6 473 aa4.17□□□□□ -1.74
SOX6-212ENST00000529469 CUZD1Q86UP6 607 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms