RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CPED1A4D0V7 1026 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 AKR1B15C9JRZ8 316 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 PROB1E7EW31 1015 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 SOCS6O14544 535 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 NKX2-2O95096 273 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 SLC4A1P02730 911 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 CLTBP09497 229 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 THEGLP0DJG4 465 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 IGHV4-30-4P0DP06 118 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 NFKBIAP25963 317 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 HNF4AP41235 474 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 METAP2P50579 478 aaKnown RBP eCLIP5.8□□□□□ -1.48
PCF11-202ENST00000528336 ALDH3A2P51648 485 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 KIF5AQ12840 1032 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 TAF7Q15545 349 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 IZUMO4Q1ZYL8 232 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 USP41Q3LFD5 358 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 PPP6R3Q5H9R7 873 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 TAOK1Q7L7X3 1001 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 EGFL6Q8IUX8 553 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 ZNF619Q8N2I2 560 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 ZNF114Q8NC26 417 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 TMEM116Q8NCL8 245 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 GOT1L1Q8NHS2 421 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 LMO3Q8TAP4 145 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 CNDP2Q96KP4 475 aaKnown RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 C3orf30Q96M34 536 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 OR1F2PQ96R84 312 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 IFIH1Q9BYX4 1025 aaKnown RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 C6orf106Q9H6K1 298 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 PPP1R3EQ9H7J1 279 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 SCPEP1Q9HB40 452 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 CD93Q9NPY3 652 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 MALT1Q9UDY8 824 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 ZNF580Q9UK33 172 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 AGTPBP1Q9UPW5 1226 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 MTF2Q9Y483 593 aaPredicted RBP5.8□□□□□ -1.48
PCF11-202ENST00000528336 PSAT1Q9Y617 370 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 KCNE2Q9Y6J6 123 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 IKBKGQ9Y6K9 419 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 ARHGAP31Q2M1Z3 1444 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 NUP155O75694 1391 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 MROH2AA6NES4 1674 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 ZC3H13Q5T200 1668 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 RIMS1Q86UR5 1692 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 PZPP20742 1482 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 SRRM3A6NNA2 597 aaPredicted RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 PAGE4O60829 102 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 TBCAO75347 108 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 SLC22A3O75751 556 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 CLDN14O95500 239 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 AFPP02771 609 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 RPS2P15880 293 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 ART1P52961 327 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 F2RL1P55085 397 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 UBXN1Q04323 297 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 OLIG2Q13516 323 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 EIF4A2Q14240 407 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 TNIP1Q15025 636 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 MED22Q15528 200 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 CALCRLQ16602 461 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 SNX30Q5VWJ9 437 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 METTL2BQ6P1Q9 378 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 CYP20A1Q6UW02 462 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 IL27RAQ6UWB1 636 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 PRSS57Q6UWY2 283 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 RAPH1Q70E73 1250 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 ARMC9Q7Z3E5 817 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 RBM23Q86U06 439 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 NLRP14Q86W24 1093 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 ADHFE1Q8IWW8 467 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 OR8H3Q8N146 312 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 CCAR2Q8N163 923 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 SPATA18Q8TC71 538 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 FAM149B1Q96BN6 582 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 TRIM44Q96DX7 344 aaPredicted RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 MMABQ96EY8 250 aaPredicted RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 METTL2AQ96IZ6 378 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 CFAP53Q96M91 514 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 WDFY2Q96P53 400 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 TMEM47Q9BQJ4 181 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 SLCO5A1Q9H2Y9 848 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 POLR1BQ9H9Y6 1135 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 C17orf75Q9HAS0 396 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 SLC28A3Q9HAS3 691 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 FBRSL1Q9HCM7 1045 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 CCDC177Q9NQR7 707 aaPredicted RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 DLGAP2Q9P1A6 1054 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 ABI3Q9P2A4 366 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 ADD3Q9UEY8 706 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 TINAGQ9UJW2 476 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 TTC7AQ9ULT0 858 aaPredicted RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 PCDHGB1Q9Y5G3 927 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 NPATQ14207 1427 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 RAB3GAP2Q9H2M9 1393 aa5.79□□□□□ -1.48
PCF11-202ENST00000528336 CLTCQ00610 1675 aaKnown RBP5.79□□□□□ -1.48
PCF11-202ENST00000528336 TMEM110-MUSTN1A8MSY1 372 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 UBE2CO00762 179 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 VCYO14598 125 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 PLRG1O43660 514 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms