RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FAM71DQ8N9W8 422 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 OR4D9Q8NGE8 314 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 SLC38A3Q99624 504 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 FRMD8P1Q9BZ68 369 aaPredicted RBP32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 SEMA6CQ9H3T2 930 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 RALYQ9UKM9 306 aaKnown RBP32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 ACSL6Q9UKU0 697 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 R3HDM2Q9Y2K5 976 aaKnown RBP32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 ARL5AQ9Y689 179 aa32.58■■■□□ 2.81
SSSCA1-205ENST00000527920 SNX2O60749 519 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 JMJD7P0C870 316 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 LIMK2P53671 638 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 GTF2H3Q13889 308 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 PHF19Q5T6S3 580 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 DENND5AQ6IQ26 1287 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 ZNF574Q6ZN55 896 aaPredicted RBP32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 USP53Q70EK8 1073 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 GDAP1Q8TB36 358 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 TBL1YQ9BQ87 522 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 APOL2Q9BQE5 337 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 AKAP7Q9P0M2 348 aaPredicted RBP32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 SLC23A2Q9UGH3 650 aa32.57■■■□□ 2.8
SSSCA1-205ENST00000527920 IGHV5-10-1A0A0J9YXX1 117 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 TCRBV7S2A1N4TA0A589 114 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 KCNJ13O60928 360 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 CRTAMO95727 393 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 EPHA4P54764 986 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 P3H1Q32P28 736 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 SEL1L2Q5TEA6 688 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 KCTD11Q693B1 232 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 WASH2PQ6VEQ5 465 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 OR10G6Q8NH81 332 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 RTP4Q96DX8 246 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 TTC25Q96NG3 672 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 LDHAL6BQ9BYZ2 381 aaPredicted RBP32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 B3GNT4Q9C0J1 378 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 OSGEPL1Q9H4B0 414 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 WASH6PQ9NQA3 447 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 SSUH2Q9Y2M2 353 aa32.56■■■□□ 2.8
SSSCA1-205ENST00000527920 CACNA1GO43497 2377 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 TRBV23OR9-2A0A075B6M9 112 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 BUD23O43709 281 aaKnown RBP32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 VCLP18206 1134 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 CSF2RBP32927 897 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 UCNP55089 124 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 UBE2IP63279 158 aaKnown RBP32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 OLIG2Q13516 323 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 C11orf96Q7Z7L8 435 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 TRAPPC5Q8IUR0 188 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 EPB41L1Q9H4G0 881 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 PRORYQ9H606 182 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 UCK1Q9HA47 277 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 PRDM8Q9NQV8 689 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 PDP2Q9P2J9 529 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 CPNE7Q9UBL6 633 aa32.55■■■□□ 2.8
SSSCA1-205ENST00000527920 NBEAQ8NFP9 2946 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 NVLO15381 856 aaKnown RBP32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 DUX1O43812 170 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A9O60656 530 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 PRAMEF1O95521 474 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 CCDC175P0C221 793 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 HGFP14210 728 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 XRCC1P18887 633 aaPredicted RBP32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A6P19224 532 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A1P22309 533 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A4P22310 534 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A3P35503 534 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 GPRC6AQ5T6X5 926 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 AGAP9Q5VTM2 703 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 TMEM71Q6P5X7 295 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 LRRC8AQ8IWT6 810 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 OR4K2Q8NGD2 314 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 TMEM121Q9BTD3 319 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 LRRC40Q9H9A6 602 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A7Q9HAW7 530 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A10Q9HAW8 530 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 UGT1A8Q9HAW9 530 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 PISDQ9UG56 409 aa32.54■■■□□ 2.8
SSSCA1-205ENST00000527920 LILRA5A6NI73 299 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 THRAP10827 490 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 HOXB3P14651 431 aaPredicted RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 STIP1P31948 543 aaKnown RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 CFHR1Q03591 330 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 C16orf72Q14CZ0 275 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 BROXQ5VW32 411 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 NKAIN2Q5VXU1 208 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 WDR74Q6RFH5 385 aaPredicted RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 ABRAXAS1Q6UWZ7 409 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 ZNF398Q8TD17 642 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 CRELD1Q96HD1 420 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 AHCYL2Q96HN2 611 aaKnown RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 NAF1Q96HR8 494 aaKnown RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 ZNF514Q96K75 400 aaPredicted RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 CCDC74BQ96LY2 380 aa32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 DNMT3AQ9Y6K1 912 aaPredicted RBP32.53■■■□□ 2.8
SSSCA1-205ENST00000527920 AHCTF1Q8WYP5 2266 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 GPR39O43194 453 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 SLC5A2P31639 672 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 ZNF140P52738 457 aaPredicted RBP32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 GDF10P55107 478 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms