RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PIK3R3Q92569 461 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 MAP6Q96JE9 813 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 C12orf4Q9NQ89 552 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 NRBP2Q9NSY0 501 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 FBXO5Q9UKT4 447 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RGS5O15539 181 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 MYL3P08590 195 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ZNF37AP17032 561 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 ACADSBP45954 432 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 AHSA2Q719I0 299 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 EID3Q8N140 333 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PARP16Q8N5Y8 322 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PPHLN1Q8NEY8 458 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 UBASH3BQ8TF42 649 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 LPAR1Q92633 364 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 RBM4BQ9BQ04 359 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 RBM4Q9BWF3 364 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 MMP27Q9H306 513 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 SLC2A6Q9UGQ3 507 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 AZIN1O14977 448 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 GAS2O43903 313 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 DNTTP04053 509 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 LCKP06239 509 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 GJB1P08034 283 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ATP4BP51164 291 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 RAPSNQ13702 412 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 LAPTM4AQ15012 233 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ACOX1Q15067 660 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 SPATA22Q8NHS9 363 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 FAM162AQ96A26 154 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 TBCDQ9BTW9 1192 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 CYP3A43Q9HB55 503 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 TAS2R9Q9NYW1 312 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 SCAF8Q9UPN6 1271 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 OAS3Q9Y6K5 1087 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 LRRC14BA6NHZ5 514 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 LOC110117498-PIK3R3F6TDL0 507 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 RGS10O43665 173 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 B4GALT4O60513 344 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PFKMP08237 780 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PCMT1P22061 227 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 HRH2P25021 359 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 TPI1P60174 286 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 GPLD1P80108 840 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 EFL1Q7Z2Z2 1120 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 PTGR2Q8N8N7 351 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 ZNF300Q96RE9 604 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 MBOAT4Q96T53 435 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 RHNO1Q9BSD3 238 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 THUMPD3Q9BV44 507 aaKnown RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 MAGEL2Q9UJ55 1249 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 LEF1Q9UJU2 399 aaPredicted RBP12.39□□□□□ -0.43
TSKU-203ENST00000527881 IPPQ9Y573 584 aa12.39□□□□□ -0.43
TSKU-203ENST00000527881 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 A0A1W2PP18 115 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 M0QYT0 321 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 PMPCBO75439 489 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 C1RP00736 705 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CD83Q01151 205 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ERAP2Q6P179 960 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 APPL2Q8NEU8 664 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 IL17RDQ8NFM7 739 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
TSKU-203ENST00000527881 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 GSTO2Q9H4Y5 243 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ERVK13-1Q9NX77 482 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 OPTCQ9UBM4 332 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 TULP3O75386 442 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CNTN5O94779 1100 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ERCC2P18074 760 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 PAMP19021 973 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CYP2B6P20813 491 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 RRM2P31350 389 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 FOXA1P55317 472 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 UFM1P61960 85 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 SH3BP2P78314 561 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 GTF2H3Q13889 308 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 MXD4Q14582 209 aaPredicted RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 ATP6AP1LQ52LC2 224 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms