RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PLATP00750 562 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CHMP24386 653 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CD79BP40259 229 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CLCN2P51788 898 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RHOAP61586 193 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SNRPFP62306 86 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RPA4Q13156 261 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 MADCAM1Q13477 382 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TDGQ13569 410 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KRBOX4Q5JUW0 171 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FBXO47Q5MNV8 452 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ATF7IP2Q5U623 682 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 OVOS1Q6IE37 1185 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 MB21D2Q8IYB1 491 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ACBD4Q8NC06 268 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ATP6V1C2Q8NEY4 427 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 VANGL1Q8TAA9 524 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ATOH1Q92858 354 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RBM4BQ9BQ04 359 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KXD1Q9BQD3 176 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CNPPD1Q9BV87 410 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RBM4Q9BWF3 364 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SEMA4AQ9H3S1 761 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 UNKLQ9H9P5 680 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 DZANK1Q9NVP4 752 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PPP4R1LQ9P1A2 415 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TAF6LQ9Y6J9 622 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 UMODL1Q5DID0 1318 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CRYBG1Q9Y4K1 1723 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 H3BNH8 94 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 XKRYO14609 159 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ARPC2O15144 300 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 LINGO3P0C6S8 592 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 BUD31P41223 144 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GPD2P43304 727 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 NKX6-1P78426 367 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 MXD1Q05195 221 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SP140Q13342 867 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CLCA4Q14CN2 919 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PDIA6Q15084 440 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 QRICH1Q2TAL8 776 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TDRD10Q5VZ19 366 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF517Q6ZMY9 492 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SLC37A3Q8NCC5 494 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TERB2Q8NHR7 220 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PHOSPHO2Q8TCD6 241 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FCGR1BQ92637 280 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 NODALQ96S42 347 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TCF7L1Q9HCS4 588 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FARSBQ9NSD9 589 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TRPS1Q9UHF7 1281 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ERVK-11Q9UQG0 969 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PCDHGB5Q9Y5G0 923 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PCDHA10Q9Y5I2 948 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GAKO14976 1311 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 THSD7AQ9UPZ6 1657 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF609O15014 1411 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 LCHNA4D1U4 455 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 OGTO15294 1046 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 HSPA12AO43301 675 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 VAPBO95292 243 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 NDUFB10O96000 172 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 JCHAINP01591 159 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ADH1AP07327 375 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 MUTP22033 750 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 PRKACBP22694 351 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ELK3P41970 407 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GRIA1P42261 906 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ALDH3B1P43353 468 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KCNJ2P63252 427 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SLC3A1Q07837 685 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF792Q3KQV3 632 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TATDN1Q6P1N9 297 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF529Q6P280 563 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 C16orf86Q6ZW13 317 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GPSM1Q86YR5 675 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TOMM5Q8N4H5 51 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SLC44A3Q8N4M1 653 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 C3orf58Q8NDZ4 430 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GMCL1P1Q8NEA9 526 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 UBA3Q8TBC4 463 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RFKQ969G6 155 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ERLEC1Q96DZ1 483 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 LURAP1Q96LR2 239 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FUZQ9BT04 418 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ELAC1Q9H777 363 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CLDND1Q9NY35 253 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KLQ9UEF7 1012 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KCNE2Q9Y6J6 123 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 AP1M2Q9Y6Q5 423 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 H0YGN5 161 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 EN2P19622 333 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 IGFBP5P24593 272 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 FNTBP49356 437 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 IDH3GP51553 393 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TMBIM6P55061 237 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PFKPQ01813 784 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 IRF8Q02556 426 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 LIPEQ05469 1076 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms