RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 A0A0G2JNG1 304 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 TEX51A0A1B0GUA7 166 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 A6NCN8 305 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 OR5K4A6NMS3 321 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 KIR2DS3K7RE56 304 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CHUKO15111 745 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 DUX1O43812 170 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 PRAMEF10O60809 474 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CCL4P13236 92 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 ZNF7P17097 686 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CDC25BP30305 580 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 SPAM1P38567 509 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 MAPK9P45984 424 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CFHR1Q03591 330 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 TMEM115Q12893 351 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-203ENST00000525013 SQSTM1Q13501 440 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 GTF2H3Q13889 308 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 KIR2DS5Q14953 304 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CHRNA6Q15825 494 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 SNAP47Q5SQN1 464 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 TMEM164Q5U3C3 297 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 TRAPPC5Q8IUR0 188 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CCDC110Q8TBZ0 833 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 APOL2Q9BQE5 337 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.3■□□□□ 0.52
CAPN1-203ENST00000525013 TMEM9Q9P0T7 183 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 CPNE7Q9UBL6 633 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 PACSIN2Q9UNF0 486 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-203ENST00000525013 GLYATL1P3A0A0U1RQE8 302 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 A0A0U1RQJ8 604 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 GOLGA6L9A6NEM1 432 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 PDZK1P1A8MUH7 402 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 GOLGA6L6A8MZA4 724 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 STX7O15400 261 aaKnown RBP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A9O60656 530 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 FTCDO95954 541 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A6P19224 532 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A1P22309 533 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A4P22310 534 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 PSMB4P28070 264 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 CSTF2P33240 577 aaKnown RBP eCLIP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A3P35503 534 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 CLCNKAP51800 687 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 VAC14Q08AM6 782 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 TRA2AQ13595 282 aaKnown RBP eCLIP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 TGIF1Q15583 401 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 SEPT7Q16181 437 aaKnown RBP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 TMEM71Q6P5X7 295 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 TRIM48Q8IWZ4 208 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 AVL9Q8NBF6 648 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 AGBL5Q8NDL9 886 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 NCSTNQ92542 709 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 SPATA13Q96N96 652 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 GORASP1Q9BQQ3 440 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 TIMM29Q9BSF4 260 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A7Q9HAW7 530 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A10Q9HAW8 530 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 UGT1A8Q9HAW9 530 aa18.29■□□□□ 0.52
CAPN1-203ENST00000525013 AAR2Q9Y312 384 aaKnown RBP18.29■□□□□ 0.52
CAPN1-203ENST00000525013 MIF4GDA9UHW6 222 aaKnown RBP18.28■□□□□ 0.52
CAPN1-203ENST00000525013 PPFIA2O75334 1257 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 THRAP10827 490 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 OLIG2Q13516 323 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 PTPRCAPQ14761 206 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 CCDC81Q6ZN84 652 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 ZFAND4Q86XD8 727 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 ZNF547Q8IVP9 402 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 BRSK1Q8TDC3 778 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 CCNL2Q96S94 520 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-203ENST00000525013 FOXJ2Q9P0K8 574 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 ACSL6Q9UKU0 697 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 ARL5AQ9Y689 179 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 SDK2Q58EX2 2172 aa18.28■□□□□ 0.52
CAPN1-203ENST00000525013 ATMQ13315 3056 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 C2orf81A6NN90 581 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 A8MU76 341 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 C9orf172C9J069 976 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 GPR39O43194 453 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 KALRNO60229 2985 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 VIPP01282 170 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 FGF3P11487 239 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-203ENST00000525013 VCLP18206 1134 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 LPOP22079 712 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-203ENST00000525013 IDSP22304 550 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 RPL10P27635 214 aaKnown RBP18.27■□□□□ 0.52
CAPN1-203ENST00000525013 ITGA9Q13797 1035 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 LDLRAP1Q5SW96 308 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 RANBP10Q6VN20 620 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 FAM129CQ86XR2 697 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 CCDC112Q8NEF3 446 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 TBC1D10AQ9BXI6 508 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 ZCCHC2Q9C0B9 1178 aaKnown RBP18.27■□□□□ 0.52
CAPN1-203ENST00000525013 SCHIP1Q9P0W5 487 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-203ENST00000525013 SSUH2Q9Y2M2 353 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 PCDHB11Q9Y5F2 797 aa18.27■□□□□ 0.52
CAPN1-203ENST00000525013 PIEZO2Q9H5I5 2752 aa18.27■□□□□ 0.51
CAPN1-203ENST00000525013 ATXN7O15265 892 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 ZNF189O75820 626 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms