RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PEX13Q92968 403 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 LRRC45Q96CN5 670 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 SGSM3Q96HU1 749 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 CAPZA3Q96KX2 299 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 TIMM29Q9BSF4 260 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 KIFC1Q9BW19 673 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 FAM96AQ9H5X1 160 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 ASB8Q9H765 288 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 TREX1Q9NSU2 369 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 SIRPGQ9P1W8 387 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 MSRB2Q9Y3D2 182 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 RNF215Q9Y6U7 377 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 DMXL2Q8TDJ6 3036 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 EPG5Q9HCE0 2579 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 A0A1W2PQM1 296 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CCDC78A2IDD5 438 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 HEATR9A2RTY3 570 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CCDC162PA2VCL2 907 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CPED1A4D0V7 1026 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 E7EVH7 732 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 KMOO15229 486 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 PPM1DO15297 605 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 AVILO75366 819 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 ECEL1O95672 775 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 ACP5P13686 325 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 BRAFP15056 766 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 PNLIPP16233 465 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 MC4RP32245 332 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 NPY2RP49146 381 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 E2F1Q01094 437 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 DMPKQ09013 629 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 PTK6Q13882 451 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 SEPT6Q14141 434 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 SKIDA1Q1XH10 827 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 GPR33Q49SQ1 333 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 HS1BP3Q53T59 392 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.78□□□□□ -0.52
CLN8-207ENST00000524258 RNASEH2BQ5TBB1 312 aaKnown RBP11.78□□□□□ -0.52
CLN8-207ENST00000524258 IYDQ6PHW0 289 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CRTC3Q6UUV7 619 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 SYT10Q6XYQ8 523 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 TMPRSS12Q86WS5 348 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 SFRP1Q8N474 314 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 DCBLD1Q8N8Z6 715 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 ZDHHC1Q8WTX9 485 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 HDAC10Q969S8 669 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 DPEP2Q9H4A9 486 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 CHRAC1Q9NRG0 131 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 SCHIP1Q9P0W5 487 aaPredicted RBP11.78□□□□□ -0.52
CLN8-207ENST00000524258 RNF14Q9UBS8 474 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 ANGPTL2Q9UKU9 493 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 KCNK6Q9Y257 313 aa11.78□□□□□ -0.52
CLN8-207ENST00000524258 ZZEF1O43149 2961 aa11.77□□□□□ -0.52
CLN8-207ENST00000524258 GOLGA6L10A0A0M3HER8 536 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 B4DGG1 531 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 B4GAT1O43505 415 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 NUDT21O43809 227 aaKnown RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 POP7O75817 140 aaKnown RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 MLNP12872 115 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 GLB1P16278 677 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 ACRV1P26436 265 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 MGAT1P26572 445 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 NMBRP28336 390 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 FASLGP48023 281 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 RPIAP49247 311 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 LMAN1P49257 510 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 PDX1P52945 283 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 SESN2P58004 480 aaPredicted RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 SEMA3AQ14563 771 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 DBN1Q16643 649 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 BCL7AQ4VC05 210 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 CCDC157Q569K6 752 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 HES3Q5TGS1 186 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 TMEM220Q6QAJ8 160 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 ABRAXAS1Q6UWZ7 409 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 FAM83HQ6ZRV2 1179 aaPredicted RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 ZNF572Q7Z3I7 529 aaPredicted RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 SERPINA9Q86WD7 417 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 MPP5Q8N3R9 675 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 SLC37A2Q8TED4 501 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 GRK7Q8WTQ7 553 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 GLMNQ92990 594 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 NAT6Q93015 286 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 SGF29Q96ES7 293 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 SIGLEC10Q96LC7 697 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 LINC00615Q96LM1 132 aaPredicted RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 CCDC3Q9BQI4 270 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 IL22Q9GZX6 179 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 MRM3Q9HC36 420 aaKnown RBP11.77□□□□□ -0.53
CLN8-207ENST00000524258 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 PRDM8Q9NQV8 689 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 SYBUQ9NX95 663 aa11.77□□□□□ -0.53
CLN8-207ENST00000524258 ZDHHC3Q9NYG2 299 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms