RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SCRG1O75711 98 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 PEX11BO96011 259 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 TRBC1P01850 177 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 PYGLP06737 847 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SNRPB2P08579 225 aaKnown RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 NELFEP18615 380 aaKnown RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 IL4RP24394 825 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 HTR7P34969 479 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 HSPA9P38646 679 aaKnown RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 ITGA1P56199 1179 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 DSC2Q02487 901 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 GPS2Q13227 327 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SMTNL2Q2TAL5 461 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 FAM182AQ5T1J6 154 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 LCN10Q6JVE6 187 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 FBXO38Q6PIJ6 1188 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF765Q7L2R6 523 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 MCEMP1Q8IX19 187 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 LRRN4Q8WUT4 740 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SEC14L1Q92503 715 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 WDR24Q96S15 920 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SPATA16Q9BXB7 569 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 GPR87Q9BY21 358 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 TRIM7Q9C029 511 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 ZWILCHQ9H900 591 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 FGF21Q9NSA1 209 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 TCRBV5S1A1TA0A578 114 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PRSS44E7EML9 344 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 MASP2O00187 686 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 TOX3O15405 576 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 MAFKO60675 156 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 RNF8O76064 485 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 SLC25A14O95258 325 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF30P17039 623 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 XRCC1P18887 633 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 MIPP30301 263 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 OTX2P32243 289 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 ARCN1P48444 511 aaKnown RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 GSCP56915 257 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 ATP1A4Q13733 1029 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PLCL1Q15111 1095 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 TMCO3Q6UWJ1 677 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PRSS42Q7Z5A4 293 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 ARFGAP1Q8N6T3 406 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 AVL9Q8NBF6 648 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 KLHL6Q8WZ60 621 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 MAP3K3Q99759 626 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 AGPAT1Q99943 283 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 FAM83DQ9H4H8 585 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 WASH6PQ9NQA3 447 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 PSMD13Q9UNM6 376 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 OSGIN2Q9Y236 505 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 COPG1Q9Y678 874 aaKnown RBP11.42□□□□□ -0.58
SDCBP-211ENST00000523441 F8P00451 2351 aa11.42□□□□□ -0.58
SDCBP-211ENST00000523441 UBA6A0AVT1 1052 aaPredicted RBP11.41□□□□□ -0.58
SDCBP-211ENST00000523441 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 H3BRJ5 948 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 ZG16O60844 167 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 CPNE3O75131 537 aaKnown RBP11.41□□□□□ -0.58
SDCBP-211ENST00000523441 RECKO95980 971 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 PIRTP0C851 137 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF7P17097 686 aaPredicted RBP11.41□□□□□ -0.58
SDCBP-211ENST00000523441 ARL4AP40617 200 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 JAM2P57087 298 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 DPYSQ14117 519 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 DNTTIP2Q5QJE6 756 aaKnown RBP11.41□□□□□ -0.58
SDCBP-211ENST00000523441 SMYD5Q6GMV2 418 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 CYB5D1Q6P9G0 228 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 MCOLN2Q8IZK6 566 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 AOPEPQ8N6M6 819 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 SLC38A9Q8NBW4 561 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 SGSM3Q96HU1 749 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF514Q96K75 400 aaPredicted RBP11.41□□□□□ -0.58
SDCBP-211ENST00000523441 CARD9Q9H257 536 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 RMI1Q9H9A7 625 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 SOHLH2Q9NX45 425 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 TAS2R14Q9NYV8 317 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 PKD2L2Q9NZM6 624 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 NTNG1Q9Y2I2 539 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 CELSR1Q9NYQ6 3014 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 SPTBP11277 2137 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 PDZD2O15018 2839 aa11.41□□□□□ -0.58
SDCBP-211ENST00000523441 FZD6O60353 706 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 CEACAM4O75871 244 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 LCA5LO95447 670 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 KLK3P07288 261 aaPredicted RBP11.4□□□□□ -0.58
SDCBP-211ENST00000523441 BRAFP15056 766 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 TCF4P15884 667 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
SDCBP-211ENST00000523441 SPINT3P49223 89 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 VAV2P52735 878 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 ACY1Q03154 408 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms