RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CLCNKBP51801 687 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 RHDQ02161 417 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CDH17Q12864 832 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 GTF2H3Q13889 308 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 GRM2Q14416 872 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PON3Q15166 354 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ME3Q16798 604 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM44Q2T9K0 475 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 KCTD21Q4G0X4 260 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 KLHL12Q53G59 568 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 RUNDC3AQ59EK9 446 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 XKR4Q5GH76 650 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 MPP7Q5T2T1 576 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 EFCAB12Q6NXP0 572 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 NOTUMQ6P988 496 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 DCLRE1AQ6PJP8 1040 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ARSKQ6UWY0 536 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SPATA31D4Q6ZUB0 917 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 USP37Q86T82 979 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 FAM131BQ86XD5 332 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 FBXW8Q8N3Y1 598 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SLC37A3Q8NCC5 494 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 WDR48Q8TAF3 677 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ST7LQ8TDW4 575 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SLC20A1Q8WUM9 679 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 HTR3CQ8WXA8 447 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PSPC1Q8WXF1 523 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 NXPE2Q96DL1 559 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 C14orf79Q96F83 325 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 DNAJC1Q96KC8 554 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 TEKT5Q96M29 485 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CDCA3Q99618 268 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 C12orf57Q99622 126 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 FERMT1Q9BQL6 677 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ZSCAN5AQ9BUG6 496 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 EFHD1Q9BUP0 239 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PAPOLGQ9BWT3 736 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 RAB17Q9H0T7 212 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PIGUQ9H490 435 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 DCLRE1BQ9H816 532 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 TRIM39Q9HCM9 518 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 TAS2R10Q9NYW0 307 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 TAS2R1Q9NYW7 299 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 WHRNQ9P202 907 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SUCOQ9UBS9 1254 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 APOBEC3BQ9UH17 382 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CDC23Q9UJX2 597 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ST3GAL5Q9UNP4 418 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SIK3Q9Y2K2 1263 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 GPR45Q9Y5Y3 372 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 V9GYQ6 96 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 C5orf51A6NDU8 294 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CLDN4O14493 209 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 GABRDO14764 452 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 FSCN2O14926 492 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 B4GAT1O43505 415 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CST8O60676 142 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 UGDHO60701 494 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PHF2O75151 1096 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 GPR32O75388 356 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CKMP06732 381 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ANXA5P08758 320 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF888P0CJ79 500 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 UMPSP11172 480 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 RALBP11234 206 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TCF4P15884 667 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TNNI1P19237 187 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 HK1P19367 917 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CHRM3P20309 590 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 GGCXP38435 758 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 FEN1P39748 380 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CD79BP40259 229 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SYKP43405 635 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 MAPK8P45983 427 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 QARSP47897 775 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 RAB13P51153 203 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 HK2P52789 917 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TAS2R60P59551 318 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 VAMP2P63027 116 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 POU6F2P78424 691 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TFF2Q03403 129 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ABRQ12979 859 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PAK1Q13153 545 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ORC2Q13416 577 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 NNTQ13423 1086 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 NFYCQ13952 458 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 DGCR6Q14129 220 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 IQCCQ4KMZ1 466 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ESCO2Q56NI9 601 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CDKL4Q5MAI5 379 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 AGAP7PQ5VUJ5 663 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms