RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SLC25A14O95258 325 aaPredicted RBP16.67■□□□□ 0.26
SREK1-212ENST00000522912 NFATC1O95644 943 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 CD1EP15812 388 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 FCARP24071 287 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 EEF1DP29692 281 aaKnown RBP16.67■□□□□ 0.26
SREK1-212ENST00000522912 SH3BP2P78314 561 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 NXNQ6DKJ4 435 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 CLEC6AQ6EIG7 209 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 MACC1Q6ZN28 852 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 GPR149Q86SP6 731 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 PLEKHG4BQ96PX9 1271 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 ABCG8Q9H221 673 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 ZNF385DQ9H6B1 395 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 DZANK1Q9NVP4 752 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 TSR3Q9UJK0 312 aaKnown RBP16.67■□□□□ 0.26
SREK1-212ENST00000522912 TMPRSS11EQ9UL52 423 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 SLC8A2Q9UPR5 921 aa16.67■□□□□ 0.26
SREK1-212ENST00000522912 TCF20Q9UGU0 1960 aaKnown RBP16.67■□□□□ 0.26
SREK1-212ENST00000522912 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 NCF1BA6NI72 391 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 NCF1CA8MVU1 366 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 TRIM16O95361 564 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 NCF1P14598 390 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 VIPR1P32241 457 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 AGTR2P50052 363 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 SNCBQ16143 134 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 TANGO2Q6ICL3 276 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 GPSM1Q86YR5 675 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 CATSPER2Q96P56 530 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 MEAF6Q9HAF1 191 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 PCDH12Q9NPG4 1184 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 HPS4Q9NQG7 708 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 ZDHHC3Q9NYG2 299 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 CD84Q9UIB8 345 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 PLA2G4CQ9UP65 541 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 MUC22E2RYF6 1773 aaPredicted RBP16.66■□□□□ 0.26
SREK1-212ENST00000522912 PLXNA2O75051 1894 aa16.66■□□□□ 0.26
SREK1-212ENST00000522912 COL4A3Q01955 1670 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 KIAA1549LQ6ZVL6 1849 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 MEI4A8MW99 385 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 UPK3BL1B0FP48 263 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 UPK3BL2E5RIL1 263 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 LINC01565O15544 149 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 CYP2A6P11509 494 aaPredicted RBP16.65■□□□□ 0.26
SREK1-212ENST00000522912 CPOXP36551 454 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 B4GALNT1Q00973 533 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 ARHGEF7Q14155 803 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 UGT3A2Q3SY77 523 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 POM121L1PQ3SYA9 428 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 ZNF805Q5CZA5 627 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 HSD11B1LQ7Z5J1 315 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 SFTPA1Q8IWL2 248 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 CPSF7Q8N684 471 aaKnown RBP16.65■□□□□ 0.26
SREK1-212ENST00000522912 TRPV4Q9HBA0 871 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 STX16-NPEPL1H3BU86 382 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 STX16O14662 325 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 RPS17P08708 135 aaKnown RBP16.65■□□□□ 0.26
SREK1-212ENST00000522912 ZNF30P17039 623 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 INHBCP55103 352 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 GPRC6AQ5T6X5 926 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 ZDHHC20Q5W0Z9 365 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 CYHR1Q6ZMK1 362 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 AFAP1L2Q8N4X5 818 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 TRPC4APQ8TEL6 797 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 MCUR1Q96AQ8 359 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 MARK4Q96L34 752 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 ASB2Q96Q27 587 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 C1orf21Q9H246 121 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 OBP2AQ9NY56 170 aa16.65■□□□□ 0.26
SREK1-212ENST00000522912 LOC100653049A0A140TA62 436 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 A0A1B0GTL3 188 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 KRT34O76011 436 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 COX4I1P13073 169 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 PRDX6P30041 224 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 PGM1P36871 562 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 NSG1P42857 185 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 ST8SIA6P61647 398 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 SATB1Q01826 763 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 CLCQ05315 142 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 TGFBIQ15582 683 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 ACSBG2Q5FVE4 666 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 ANKS6Q68DC2 871 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 NAIF1Q69YI7 327 aaPredicted RBP16.64■□□□□ 0.25
SREK1-212ENST00000522912 SYCE2Q6PIF2 218 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 VITQ6UXI7 678 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 CEP70Q8NHQ1 597 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 ACTRT2Q8TDY3 377 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 CMTM5Q96DZ9 223 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 LENG8Q96PV6 779 aaPredicted RBP16.64■□□□□ 0.25
SREK1-212ENST00000522912 C1QTNF3Q9BXJ4 246 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 DENND2DQ9H6A0 471 aaPredicted RBP16.64■□□□□ 0.25
SREK1-212ENST00000522912 SLC28A3Q9HAS3 691 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 PKD2L2Q9NZM6 624 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 CD274Q9NZQ7 290 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms