RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 ARHGAP22Q7Z5H3 698 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 PLXDC1Q8IUK5 500 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 ZNF567Q8N184 647 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 IL22RA1Q8N6P7 574 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 BRSK1Q8TDC3 778 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 NKD1Q969G9 470 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 QKIQ96PU8 341 aaKnown RBP eCLIP18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 UCK1Q9HA47 277 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 SLC23A2Q9UGH3 650 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 DNAJC16Q9Y2G8 782 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 ATMQ13315 3056 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 IPO7O95373 1038 aaKnown RBP18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 PLA2G2AP14555 144 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 IDSP22304 550 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 UGT1A3P35503 534 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 UBE2IP63279 158 aaKnown RBP18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 XRCC4Q13426 336 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 PPP2R5EQ16537 467 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 BBS12Q6ZW61 710 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 IPMKQ8NFU5 416 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 PMEPA1Q969W9 287 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 CALR3Q96L12 384 aaKnown RBP18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 ZPBPQ9BS86 351 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 TBC1D10AQ9BXI6 508 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 HEMGNQ9BXL5 484 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 FSD1LQ9BXM9 530 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 ZCCHC2Q9C0B9 1178 aaKnown RBP18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 KLHL3Q9UH77 587 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 PKP3Q9Y446 797 aa18.19■□□□□ 0.5
TOP1MT-216ENST00000522121 B8ZZF3 427 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 F5H423 210 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 H7C0C1 242 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 APOC4-APOC2K7ER74 178 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 APOC2P02655 101 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 SPAM1P38567 509 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 ATP5OP48047 213 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 MARCKSL1P49006 195 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 ARSDP51689 593 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 COPS2P61201 443 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 MC2RQ01718 297 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 TMEM115Q12893 351 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 NOMO1Q15155 1222 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 SEPT7Q16181 437 aaKnown RBP18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 ANKS6Q68DC2 871 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 CEACAM20Q6UY09 585 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 TMEM26Q6ZUK4 368 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 GLT6D1Q7Z4J2 308 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 TRAPPC5Q8IUR0 188 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 CACNA2D3Q8IZS8 1091 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 TTC30BQ8N4P2 665 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 DTX3LQ8TDB6 740 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 EXTL1Q92935 676 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 OXNAD1Q96HP4 312 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 MRGPRX2Q96LB1 330 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 IL26Q9NPH9 171 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 FBXO8Q9NRD0 319 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 SCHIP1Q9P0W5 487 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 TFR2Q9UP52 801 aa18.18■□□□□ 0.5
TOP1MT-216ENST00000522121 KCNJ13O60928 360 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 PPFIA2O75334 1257 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 UBXN7O94888 489 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 AMD1P17707 334 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 CHRNA4P43681 627 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 GEMP55040 296 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 NAP1L1P55209 391 aaKnown RBP18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 KHDC1Q4VXA5 237 aaKnown RBP18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 LDLRAP1Q5SW96 308 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 ITPRIPL1Q6GPH6 555 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 ABRAXAS1Q6UWZ7 409 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 WASH2PQ6VEQ5 465 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 ZNF547Q8IVP9 402 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 RBM12BQ8IXT5 1001 aaKnown RBP18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 KRT35Q92764 455 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 CXorf40BQ96DE9 158 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 PANX2Q96RD6 677 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 WASH6PQ9NQA3 447 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 POT1Q9NUX5 634 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 IL17CQ9P0M4 197 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 AHCTF1Q8WYP5 2266 aa18.17■□□□□ 0.5
TOP1MT-216ENST00000522121 GCN1Q92616 2671 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 GLYATL1P3A0A0U1RQE8 302 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 RAD1O60671 282 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 ANXA9O76027 345 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 NDUFA10O95299 355 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 SFTPCP11686 197 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 CTNNA2P26232 953 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 CETN2P41208 172 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 SLC19A1P41440 591 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 HALP42357 657 aa18.16■□□□□ 0.5
TOP1MT-216ENST00000522121 ITGA9Q13797 1035 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms