RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TRIM73Q86UV7 250 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 TBC1D21Q8IYX1 336 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 BRSK1Q8TDC3 778 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 PNPLA8Q9NP80 782 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 ARL8BQ9NVJ2 186 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 ILVBLA1L0T0 632 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 H0Y858 1186 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 HAT1O14929 419 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 CD48P09326 243 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 NOS3P29474 1203 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 RPL38P63173 70 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 METTL21CQ5VZV1 264 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 SRFBP1Q8NEF9 429 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 PNPT1Q8TCS8 783 aaKnown RBP16.07■□□□□ 0.16
USP42-207ENST00000521713 TPD52L3Q96J77 140 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 C7orf26Q96N11 449 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 RAD9AQ99638 391 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 ARHGAP39Q9C0H5 1083 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 SCML2Q9UQR0 700 aa16.07■□□□□ 0.16
USP42-207ENST00000521713 PHRF1Q9P1Y6 1649 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 LOC100506127A0A0U1RQW1 187 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 PRDX6P30041 224 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 MAGEA11P43364 429 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 TRMT61BQ9BVS5 477 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 EIF2B3Q9NR50 452 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 DNAJC11Q9NVH1 559 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 STON1Q9Y6Q2 735 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 NADKO95544 446 aaPredicted RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 LSM12Q3MHD2 195 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 TSTD2Q5T7W7 516 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 CMC1Q7Z7K0 106 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 GPR180Q86V85 440 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 AUTS2Q8WXX7 1259 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 TLCD1Q96CP7 247 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 HMGXB4Q9UGU5 601 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 PRKAR1AP10644 381 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 TRNAU1APQ9NX07 287 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 OR10H1Q9Y4A9 318 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 ENO2P09104 434 aaPredicted RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 HCAR3P49019 387 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 CCR4P51679 360 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 UBXN2BQ14CS0 331 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 ZFP69Q49AA0 526 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 NARS2Q96I59 477 aaKnown RBP16.06■□□□□ 0.16
USP42-207ENST00000521713 SLITRK2Q9H156 845 aa16.06■□□□□ 0.16
USP42-207ENST00000521713 ENPP3O14638 875 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 NTRK1P04629 796 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 CRATP43155 626 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 RPL26P61254 145 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 STX4Q12846 297 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 FAM47BQ8NA70 645 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ZNF540Q8NDQ6 660 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 HOPXQ9BPY8 73 aaPredicted RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 WRAP53Q9BUR4 548 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 PIGUQ9H490 435 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 DTLQ9NZJ0 730 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 AKT2P31751 481 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 LGALS3BPQ08380 585 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 USP4Q13107 963 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SF1Q15637 639 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 C5orf22Q49AR2 442 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 GPR156Q8NFN8 814 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SUN5Q8TC36 379 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 CLEC4CQ8WTT0 213 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 RPL10LQ96L21 214 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 ACAT2Q9BWD1 397 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 TMEM165Q9HC07 324 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ZNF180Q9UJW8 692 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 CARD8Q9Y2G2 431 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SLC7A4O43246 635 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 OR6A2O95222 327 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 HAPLN1P10915 354 aaPredicted RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 UBAP2LQ14157 1087 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 FGD3Q5JSP0 725 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 TNS4Q8IZW8 715 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ELAC1Q9H777 363 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 UBE2QL1A1L167 161 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 FPGTO14772 594 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ZNF623O75123 536 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ESR1P03372 595 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 GDI1P31150 447 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 BLKP51451 505 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 RPS24P62847 133 aaKnown RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 ECT2LQ008S8 904 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 ANXA8L1Q5VT79 327 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SMYD5Q6GMV2 418 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 MCFD2Q8NI22 146 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms