RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PEX11AO75192 247 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 FGF4P08620 206 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 C1SP09871 688 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 THRAP10827 490 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 EZRP15311 586 aaKnown RBP18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 VASPP50552 380 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 CLCQ05315 142 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 LRRC73Q5JTD7 316 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 MACC1Q6ZN28 852 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 SCUBE1Q8IWY4 988 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 PELI3Q8N2H9 469 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 LKAAEAR1Q8TD35 194 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 TRPC4APQ8TEL6 797 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 WFIKKN2Q8TEU8 576 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 GDPD5Q8WTR4 605 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 FAM161BQ96MY7 647 aa18.27■□□□□ 0.52
TRAPPC9-210ENST00000521667 RGSL1A5PLK6 1076 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 NCF1BA6NI72 391 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 NCF1CA8MVU1 366 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 PPP6CO00743 305 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 SNX2O60749 519 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 ENTPD5O75356 428 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 LEFTY1O75610 366 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 SLC25A14O95258 325 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 ASLP04424 464 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 SRPRAP08240 638 aaKnown RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 NCF1P14598 390 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 ITGB6P18564 788 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 HK3P52790 923 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 LCP2Q13094 533 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 CUL3Q13618 768 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 UGT3A2Q3SY77 523 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 FAM78AQ5JUQ0 283 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 NPAS3Q8IXF0 933 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 ULK2Q8IYT8 1036 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 NAT14Q8WUY8 206 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 RTKNQ9BST9 563 aa18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 COPG1Q9Y678 874 aaKnown RBP18.27■□□□□ 0.51
TRAPPC9-210ENST00000521667 TRIM16O95361 564 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 SPINT3P49223 89 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 RGS4P49798 205 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 ARSIQ5FYB1 569 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 RFLNAQ6ZTI6 216 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 CHSY3Q70JA7 882 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 C12orf40Q86WS4 652 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 VN1R2Q8NFZ6 395 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 RP9Q8TA86 221 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 BPIFB1Q8TDL5 484 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 MARK4Q96L34 752 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZBTB26Q9HCK0 441 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 MRGBPQ9NV56 204 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZDHHC3Q9NYG2 299 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 NUDT4Q9NZJ9 180 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 CD274Q9NZQ7 290 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 SLC27A6Q9Y2P4 619 aa18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 TNRC18O15417 2968 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-210ENST00000521667 TSPAN11A1L157 253 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 AZIN1O14977 448 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 CYP2A6P11509 494 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZNF30P17039 623 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 NSG1P42857 185 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ARHGEF7Q14155 803 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 KPNB1Q14974 876 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 HERC3Q15034 1050 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 TGFBIQ15582 683 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ATP13A5Q4VNC0 1218 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 PPP2R2DQ66LE6 453 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ADAMTSL2Q86TH1 951 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 SNX32Q86XE0 403 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZNF483Q8TF39 744 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 C19orf60Q96EN9 201 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ASB16Q96NS5 453 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 COPS8Q99627 209 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 GDF15Q99988 308 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 RNPEPL1Q9HAU8 725 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 PKD2L2Q9NZM6 624 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 IL36AQ9UHA7 158 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 DNAJC15Q9Y5T4 150 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 RFXAPO00287 272 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 TULP3O75386 442 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ITGAXP20702 1163 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 DGKAP23743 735 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 VIPR1P32241 457 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 AGTR2P50052 363 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 KCNC3Q14003 757 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 FBXO48Q5FWF7 155 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 KANK2Q63ZY3 851 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 CYHR1Q6ZMK1 362 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 MYO1HQ8N1T3 1032 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZBTB2Q8N680 514 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 WDR60Q8WVS4 1066 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 SMARCD2Q92925 531 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 ULK4Q96C45 1275 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 CLPTM1LQ96KA5 538 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 LMAN2LQ9H0V9 348 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 MTG2Q9H4K7 406 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 SEMA4BQ9NPR2 832 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 PCTPQ9UKL6 214 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 L3MBTL1Q9Y468 752 aa18.25■□□□□ 0.51
TRAPPC9-210ENST00000521667 A0A088AWK7 358 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms