RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TCP11Q8WWU5 503 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PPM1EQ8WY54 764 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 MRPS27Q92552 414 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 RAD54LQ92698 747 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 C3orf49Q96BT1 292 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 DHX58Q96C10 678 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 FRG2BQ96QU4 278 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PYM1Q9BRP8 204 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TIPINQ9BVW5 301 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 IFT27Q9BW83 186 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PANK2Q9BZ23 570 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 MAGEH1Q9H213 219 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 CUEDC2Q9H467 287 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 DHX33Q9H6R0 707 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 BLOC1S4Q9NUP1 217 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 DDX19AQ9NUU7 478 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ZDHHC7Q9NXF8 308 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 SUCLA2Q9P2R7 463 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 IL36RNQ9UBH0 155 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TUBE1Q9UJT0 475 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TBX21Q9UL17 535 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 RAP2CQ9Y3L5 183 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PTGDR2Q9Y5Y4 395 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 BAZ2BQ9UIF8 2168 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ZSWIM8A7E2V4 1837 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 COL11A1P12107 1806 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CASP8AP2Q9UKL3 1982 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 A0A1B0GVL5 298 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TCRBV7S3A2A0A539 114 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC189A1A4V9 331 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 HMX3A6NHT5 357 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 RSPH10B2B2RC85 870 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ACKR2O00590 384 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 IRAK2O43187 625 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 RGS14O43566 566 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 USO1O60763 962 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMCC1O94876 653 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TIMP1P01033 207 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CHRNA1P02708 482 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 IQCF3P0C7M6 154 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 RSPH10BP0C881 870 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ENO3P13929 434 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PFKFB1P16118 471 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GLRA2P23416 452 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PRPH2P23942 346 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PRKCHP24723 683 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMOD1P28289 359 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 SERPINA4P29622 427 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ARL2P36404 184 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 AVPR1AP37288 418 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 THPOP40225 353 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PCYT1AP49585 367 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CLCN3P51790 818 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 NDUFA8P51970 172 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CRYBB1P53674 252 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 SELENOVP59797 346 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 UBE2HP62256 183 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 MRPS6P82932 125 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 POU5F1BQ06416 359 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CDK18Q07002 472 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 LAMTOR4Q0VGL1 99 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GALNT1Q10472 559 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 FOXO1Q12778 655 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GPS2Q13227 327 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 DRP2Q13474 957 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GIT2Q14161 759 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 MXD4Q14582 209 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 EMC2Q15006 297 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 DUSP6Q16828 381 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM95Q3KNT9 176 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM268Q5VZI3 342 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 DGAT2L7PQ6IED9 249 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 HEPHL1Q6MZM0 1159 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 FAM43BQ6ZT52 329 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 LRRC8DQ7L1W4 858 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF410Q86VK4 478 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GPBP1Q86WP2 473 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PALB2Q86YC2 1186 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ZDHHC23Q8IYP9 409 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CEP57L1Q8IYX8 460 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CACNA2D3Q8IZS8 1091 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM217Q8N7C4 229 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PDILTQ8N807 584 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 USP38Q8NB14 1042 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 MCPH1Q8NEM0 835 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 LRRC15Q8TF66 581 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 SLC35F5Q8WV83 523 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PRPF31Q8WWY3 499 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PSPC1Q8WXF1 523 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 KIFAP3Q92845 792 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 ZBTB10Q96DT7 871 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PAGE5Q96GU1 130 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC43Q96MW1 224 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TIGD1Q96MW7 591 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 MAP7D2Q96T17 732 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 CADM1Q9BY67 442 aaKnown RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 FAM49AQ9H0Q0 323 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms