RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PM20D2Q8IYS1 436 aa5□□□□□ -1.61
SKP1-208ENST00000521216 DCP1BQ8IZD4 617 aaKnown RBP5□□□□□ -1.61
SKP1-208ENST00000521216 SLC5A8Q8N695 610 aa5□□□□□ -1.61
SKP1-208ENST00000521216 POC5Q8NA72 575 aa5□□□□□ -1.61
SKP1-208ENST00000521216 PPP4R1Q8TF05 950 aa5□□□□□ -1.61
SKP1-208ENST00000521216 CD101Q93033 1021 aa5□□□□□ -1.61
SKP1-208ENST00000521216 CTAGE1Q96RT6 745 aa5□□□□□ -1.61
SKP1-208ENST00000521216 MXD3Q9BW11 206 aa5□□□□□ -1.61
SKP1-208ENST00000521216 EVA1AQ9H8M9 152 aa5□□□□□ -1.61
SKP1-208ENST00000521216 ARHGEF38Q9NXL2 777 aa5□□□□□ -1.61
SKP1-208ENST00000521216 NSMCE4AQ9NXX6 385 aa5□□□□□ -1.61
SKP1-208ENST00000521216 A8MV72 311 aaPredicted RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 J3QR06 171 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 ZNHIT1O43257 154 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 BUB3O43684 328 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 MITFO75030 526 aaPredicted RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 RSL1D1O76021 490 aaKnown RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 TUBBP07437 444 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 MMP9P14780 707 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 KCNA5P22460 613 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 NR2F2P24468 414 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 NRIP1P48552 1158 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 SUOXP51687 545 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 GAS1P54826 345 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 ERVFC1-1P60608 527 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 RPL36AP83881 106 aaKnown RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 KRT33BQ14525 404 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 ASB18Q6ZVZ8 466 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 MAB21L3Q8N8X9 362 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 IL17RCQ8NAC3 791 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 NUDT16L1Q9BRJ7 211 aaKnown RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 EBF2Q9HAK2 575 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 TCP11L1Q9NUJ3 509 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 TSPYL4Q9UJ04 414 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 RPS6KA6Q9UK32 745 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 PTRH2Q9Y3E5 179 aaKnown RBP4.99□□□□□ -1.61
SKP1-208ENST00000521216 PCDHGA5Q9Y5G8 931 aa4.99□□□□□ -1.61
SKP1-208ENST00000521216 PRAG1Q86YV5 1406 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 TMEM178BH3BS89 294 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 K7ENM7 598 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 WDR1O75083 606 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 LDB3O75112 727 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 ZNF217O75362 1048 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 GH2P01242 217 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 KRT19P08727 400 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 EIF2DP41214 584 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 MMP14P50281 582 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 PSMC6P62333 389 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 EEF1A1P68104 462 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 TMF1P82094 1093 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 EPS8Q12929 822 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 SYT16Q17RD7 645 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 IGSF11Q5DX21 431 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 STXBP5Q5T5C0 1151 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 CFAP58Q5T655 872 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 EEF1A1P5Q5VTE0 462 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 ZDHHC20Q5W0Z9 365 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 PCGF5Q86SE9 256 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 AACSQ86V21 672 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 CEP97Q8IW35 865 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 MUC20Q8N307 709 aaPredicted RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 LNX1Q8TBB1 728 aaPredicted RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 CCDC34Q96HJ3 373 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 RSRC1Q96IZ7 334 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 FEM1CQ96JP0 617 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 DOCK7Q96N67 2140 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 PAFAH2Q99487 392 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 NEURL2Q9BR09 285 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 HGH1Q9BTY7 390 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 SEMA6AQ9H2E6 1030 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 KLHL9Q9P2J3 617 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 SEC63Q9UGP8 760 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 ZNF711Q9Y462 761 aa4.98□□□□□ -1.61
SKP1-208ENST00000521216 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.98□□□□□ -1.61
SKP1-208ENST00000521216 ASPDHA6ND91 283 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 TMEM8BA6NDV4 472 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 OR5K3A6NET4 321 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
SKP1-208ENST00000521216 BEST1O76090 585 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 STARD3NLO95772 234 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 LDHCP07864 332 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 SELLP14151 372 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 DGKAP23743 735 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 FMO5P49326 533 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 POU3F1Q03052 451 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 SPOCK1Q08629 439 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 STK4Q13043 487 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 ZNF704Q6ZNC4 412 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 TPRG1Q6ZUI0 275 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 ATG9AQ7Z3C6 839 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 KBTBD6Q86V97 674 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 NR2C2APQ86WQ0 139 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 NAGSQ8N159 534 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 SLC38A9Q8NBW4 561 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 APPL2Q8NEU8 664 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 OR13A1Q8NGR1 328 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms