RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CDKN2BP42772 138 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 NFKB2Q00653 900 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 KCNC4Q03721 635 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 TFDP2Q14188 446 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 KHDC1Q4VXA5 237 aaKnown RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 TIPARPQ7Z3E1 657 aaKnown RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 ZNF547Q8IVP9 402 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 TFB1MQ8WVM0 346 aaKnown RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 SLC45A3Q96JT2 553 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 ANP32EQ9BTT0 268 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 SLC25A18Q9H1K4 315 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 ADNPQ9H2P0 1102 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 UBP1Q9NZI7 540 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 SAE1Q9UBE0 346 aaPredicted RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 TMPRSS11EQ9UL52 423 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 DNAJC16Q9Y2G8 782 aa19.35■□□□□ 0.69
PABPC1-215ENST00000520804 TMEM184BQ9Y519 407 aaPredicted RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 SETXQ7Z333 2677 aaKnown RBP19.35■□□□□ 0.69
PABPC1-215ENST00000520804 LOC285095A0A1B0GVY8 99 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 PDZK1P1A8MUH7 402 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 POLR1CO15160 346 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 SUV39H1O43463 412 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 SPOPO43791 374 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 STK17BO94768 372 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 UBXN7O94888 489 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 CDK14O94921 469 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 C9P02748 559 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 PECAM1P16284 738 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 CD68P34810 354 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 GFERP55789 205 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 WASHC5Q12768 1159 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 SEPT7Q16181 437 aaKnown RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 ABRAXAS1Q6UWZ7 409 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 ATG14Q6ZNE5 492 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 TRIM48Q8IWZ4 208 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 KIAA1143Q96AT1 154 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 C9orf72Q96LT7 481 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 CATSPER2Q96P56 530 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 GPN2Q9H9Y4 310 aaPredicted RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 BPIFA1Q9NP55 256 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 POT1Q9NUX5 634 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 SIDT1Q9NXL6 827 aaKnown RBP19.34■□□□□ 0.69
PABPC1-215ENST00000520804 FAM153AQ9UHL3 310 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 SLC30A1Q9Y6M5 507 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 BOD1L1Q8NFC6 3051 aa19.34■□□□□ 0.69
PABPC1-215ENST00000520804 LOC101059948A0A1B0GTJ6 334 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 TERTO14746 1132 aaKnown RBP19.33■□□□□ 0.68
PABPC1-215ENST00000520804 CST8O60676 142 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 BRAFP15056 766 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 TYRP1P17643 537 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 HMGCLP35914 325 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 ABHD18Q0P651 414 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 ATP13A5Q4VNC0 1218 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 AGAP9Q5VTM2 703 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 KDELC1Q6UW63 502 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 WASH2PQ6VEQ5 465 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 EFHD1Q9BUP0 239 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 TRIM4Q9C037 500 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 TRIT1Q9H3H1 467 aaKnown RBP19.33■□□□□ 0.68
PABPC1-215ENST00000520804 TRABDQ9H4I3 376 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 WASH6PQ9NQA3 447 aa19.33■□□□□ 0.68
PABPC1-215ENST00000520804 FLNBO75369 2602 aaKnown RBP19.32■□□□□ 0.68
PABPC1-215ENST00000520804 TOX3O15405 576 aaPredicted RBP19.32■□□□□ 0.68
PABPC1-215ENST00000520804 NKX2-8O15522 239 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 MTSS1O43312 755 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 PSTPIP1O43586 416 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 DLGAP3O95886 979 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 EPOP01588 193 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 AMD1P17707 334 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 NFKB1P19838 968 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 IDSP22304 550 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 RPL10P27635 214 aaKnown RBP19.32■□□□□ 0.68
PABPC1-215ENST00000520804 CSRP3P50461 194 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 POLE2P56282 527 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 WNT3AP56704 352 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 TMEM115Q12893 351 aaPredicted RBP19.32■□□□□ 0.68
PABPC1-215ENST00000520804 NOMO1Q15155 1222 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 LLGL1Q15334 1064 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 KAZNQ674X7 775 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 SPOCD1Q6ZMY3 1216 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 C11orf96Q7Z7L8 435 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 CNGA4Q8IV77 575 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 UNC5BQ8IZJ1 945 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 DTX3LQ8TDB6 740 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 TGM7Q96PF1 710 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 IL26Q9NPH9 171 aa19.32■□□□□ 0.68
PABPC1-215ENST00000520804 CCR10P46092 362 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 DRG2P55039 364 aaKnown RBP19.31■□□□□ 0.68
PABPC1-215ENST00000520804 HADHBP55084 474 aaKnown RBP19.31■□□□□ 0.68
PABPC1-215ENST00000520804 ADCY2Q08462 1091 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 KCNAB2Q13303 367 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 GTF2H3Q13889 308 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 MAP7Q14244 749 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 SKOR2Q2VWA4 1001 aaPredicted RBP19.31■□□□□ 0.68
PABPC1-215ENST00000520804 SIRPB2Q5JXA9 342 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 ZDHHC20Q5W0Z9 365 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 TRAPPC5Q8IUR0 188 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 RBM12BQ8IXT5 1001 aaKnown RBP19.31■□□□□ 0.68
PABPC1-215ENST00000520804 TTC30BQ8N4P2 665 aa19.31■□□□□ 0.68
PABPC1-215ENST00000520804 GDAP1Q8TB36 358 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms