RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 BRSK1Q8TDC3 778 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
PVT1-208ENST00000519481 CXorf40BQ96DE9 158 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 PLEKHG4BQ96PX9 1271 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 TRIB3Q96RU7 358 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 TRABDQ9H4I3 376 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 GLOD4Q9HC38 313 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 TUBD1Q9UJT1 453 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 DNAJC16Q9Y2G8 782 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 MYO18BQ8IUG5 2567 aa10.72□□□□□ -0.69
PVT1-208ENST00000519481 C3orf70A6NLC5 250 aaPredicted RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 CHUKO15111 745 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TOX3O15405 576 aaPredicted RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 MTSS1O43312 755 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 SUV39H1O43463 412 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 RASSF9O75901 435 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 ANKRD34CP0C6C1 535 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 PRKAR1AP10644 381 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 BPIP17213 487 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TYRP1P17643 537 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 HALP42357 657 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 POLE2P56282 527 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 NFKB2Q00653 900 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 FOXM1Q08050 763 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 MN1Q10571 1320 aaPredicted RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 CLCA4Q14CN2 919 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 PLA2G4EQ3MJ16 856 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TRAPPC5Q8IUR0 188 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 SPATA22Q8NHS9 363 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TFB1MQ8WVM0 346 aaKnown RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 EID2BQ96D98 161 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 C9orf72Q96LT7 481 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TEKT5Q96M29 485 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 OLFM3Q96PB7 478 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TGM7Q96PF1 710 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 VPS35Q96QK1 796 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TRIM4Q9C037 500 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 ZCCHC2Q9C0B9 1178 aaKnown RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 NHEJ1Q9H9Q4 299 aaPredicted RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 ABHD10Q9NUJ1 306 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 SPTLC3Q9NUV7 552 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 POT1Q9NUX5 634 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
PVT1-208ENST00000519481 FAM153AQ9UHL3 310 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 INTUQ9ULD6 942 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 TMEM184BQ9Y519 407 aaPredicted RBP10.71□□□□□ -0.69
PVT1-208ENST00000519481 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
PVT1-208ENST00000519481 LOC101059948A0A1B0GTJ6 334 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 KCNJ13O60928 360 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 MTX2O75431 263 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 MT-CYBP00156 380 aaPredicted RBP10.7□□□□□ -0.7
PVT1-208ENST00000519481 C9P02748 559 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 TCN2P20062 427 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 PTPN3P26045 913 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 SLC19A1P41440 591 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 CDC20Q12834 499 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 TMEM115Q12893 351 aaPredicted RBP10.7□□□□□ -0.7
PVT1-208ENST00000519481 SEPT6Q14141 434 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 MAP7Q14244 749 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 SEPT7Q16181 437 aaKnown RBP10.7□□□□□ -0.7
PVT1-208ENST00000519481 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
PVT1-208ENST00000519481 AGAP9Q5VTM2 703 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 ABRAXAS1Q6UWZ7 409 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 MFSD7Q6UXD7 560 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 WASH2PQ6VEQ5 465 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 CNGA4Q8IV77 575 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 P3H4Q92791 437 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 TADA1Q96BN2 335 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 ZDHHC12Q96GR4 267 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 CHP1Q99653 195 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 FERMT1Q9BQL6 677 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 ULBP3Q9BZM4 244 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 SPRY4Q9C004 299 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 APMAPQ9HDC9 416 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 BPIFA1Q9NP55 256 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 WASH6PQ9NQA3 447 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 UBP1Q9NZI7 540 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 HACD3Q9P035 362 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
PVT1-208ENST00000519481 SLC23A2Q9UGH3 650 aa10.7□□□□□ -0.7
PVT1-208ENST00000519481 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
PVT1-208ENST00000519481 NKX2-8O15522 239 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 PSTPIP1O43586 416 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 CST8O60676 142 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 MFAP3LO75121 409 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 EPOP01588 193 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 COMTP21964 271 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 RPL10P27635 214 aaKnown RBP10.69□□□□□ -0.7
PVT1-208ENST00000519481 HMGCLP35914 325 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 SPAM1P38567 509 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 STAT5AP42229 794 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 SEPHS1P49903 392 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 GFERP55789 205 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 WNT3AP56704 352 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 IL11RAQ14626 422 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 PPP2R5EQ16537 467 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 ATP13A5Q4VNC0 1218 aa10.69□□□□□ -0.7
PVT1-208ENST00000519481 CRTC2Q53ET0 693 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms